RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.73
PACS1-201ENST00000320580 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.73
PACS1-201ENST00000320580 DDX54Q8TDD1 881 aaKnown RBP19.58■□□□□ 0.73
PACS1-201ENST00000320580 CABP2Q9NPB3 220 aa19.58■□□□□ 0.73
PACS1-201ENST00000320580 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.72
PACS1-201ENST00000320580 TPM1P09493 284 aa19.58■□□□□ 0.72
PACS1-201ENST00000320580 CTR9Q6PD62 1173 aa19.58■□□□□ 0.72
PACS1-201ENST00000320580 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
PACS1-201ENST00000320580 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.72
PACS1-201ENST00000320580 HSP90AB3PQ58FF7 597 aa19.57■□□□□ 0.72
PACS1-201ENST00000320580 ERO1AQ96HE7 468 aa19.57■□□□□ 0.72
PACS1-201ENST00000320580 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
PACS1-201ENST00000320580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.57■□□□□ 0.723e-8■■■□□ 16.7
PACS1-201ENST00000320580 CASTP20810 708 aaKnown RBP19.56■□□□□ 0.72
PACS1-201ENST00000320580 USP8P40818 1118 aa19.56■□□□□ 0.72
PACS1-201ENST00000320580 DNM1Q05193 864 aaKnown RBP19.56■□□□□ 0.72
PACS1-201ENST00000320580 AXDND1Q5T1B0 1012 aaPredicted RBP19.56■□□□□ 0.72
PACS1-201ENST00000320580 PATL2C9JE40 543 aaKnown RBP19.56■□□□□ 0.72
PACS1-201ENST00000320580 CALRP27797 417 aaKnown RBP19.56■□□□□ 0.72
PACS1-201ENST00000320580 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
PACS1-201ENST00000320580 PDRG1Q9NUG6 133 aa19.56■□□□□ 0.72
PACS1-201ENST00000320580 TYRO3Q06418 890 aa19.56■□□□□ 0.72
PACS1-201ENST00000320580 ERLIN1O75477 346 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 CNTROBQ8N137 903 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 LRMPQ12912 555 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 LIMCH1Q9UPQ0 1083 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 PIK3C2GO75747 1445 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 ERCC4Q92889 916 aaPredicted RBP19.55■□□□□ 0.72
PACS1-201ENST00000320580 CCDC34Q96HJ3 373 aa19.55■□□□□ 0.72
PACS1-201ENST00000320580 ZNF215Q9UL58 517 aaPredicted RBP19.55■□□□□ 0.72
PACS1-201ENST00000320580 DENND4BO75064 1496 aaPredicted RBP19.55■□□□□ 0.72
PACS1-201ENST00000320580 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
PACS1-201ENST00000320580 TTC31Q49AM3 519 aaPredicted RBP19.54■□□□□ 0.72
PACS1-201ENST00000320580 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
PACS1-201ENST00000320580 SERPINC1P01008 464 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 IBSPP21815 317 aaPredicted RBP19.54■□□□□ 0.72
PACS1-201ENST00000320580 TERF2Q15554 542 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 NEK11Q8NG66 645 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 KIAA1524Q8TCG1 905 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 DNAJC25Q9H1X3 360 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 IL1RAPL2Q9NP60 686 aa19.54■□□□□ 0.72
PACS1-201ENST00000320580 NUTM2FA1L443 756 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
PACS1-201ENST00000320580 GJB2P29033 226 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 MNAT1P51948 309 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 SCAND2PQ9GZW5 306 aaPredicted RBP19.53■□□□□ 0.72
PACS1-201ENST00000320580 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
PACS1-201ENST00000320580 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 KDM5BQ9UGL1 1544 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 DRC1Q96MC2 740 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 DNAI1Q9UI46 699 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 ME1P48163 572 aa19.53■□□□□ 0.72
PACS1-201ENST00000320580 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
PACS1-201ENST00000320580 CWC27Q6UX04 472 aaKnown RBP19.53■□□□□ 0.72
PACS1-201ENST00000320580 TMEM51Q9NW97 253 aa19.52■□□□□ 0.72
PACS1-201ENST00000320580 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
PACS1-201ENST00000320580 LRRIQ1Q96JM4 1722 aa19.52■□□□□ 0.72
PACS1-201ENST00000320580 GNAI2P04899 355 aa19.52■□□□□ 0.72
PACS1-201ENST00000320580 MINK1Q8N4C8 1332 aaPredicted RBP19.52■□□□□ 0.72
PACS1-201ENST00000320580 BRD1O95696 1058 aa19.52■□□□□ 0.71
PACS1-201ENST00000320580 ZNF710Q8N1W2 664 aa19.52■□□□□ 0.71
PACS1-201ENST00000320580 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.71
PACS1-201ENST00000320580 ZSCAN31Q96LW9 406 aaPredicted RBP19.51■□□□□ 0.71
PACS1-201ENST00000320580 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 F13A1P00488 732 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 CAPN2P17655 700 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 PSMA5P28066 241 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 GIMAP7Q8NHV1 300 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
PACS1-201ENST00000320580 ARFGAP3Q9NP61 516 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 CCDC69A6NI79 296 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 SYT10Q6XYQ8 523 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 ZSWIM4Q9H7M6 989 aa19.51■□□□□ 0.71
PACS1-201ENST00000320580 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
PACS1-201ENST00000320580 HDGFP51858 240 aaKnown RBP19.5■□□□□ 0.71
PACS1-201ENST00000320580 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
PACS1-201ENST00000320580 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
PACS1-201ENST00000320580 INTS4Q96HW7 963 aaKnown RBP19.5■□□□□ 0.71
PACS1-201ENST00000320580 COL17A1Q9UMD9 1497 aaPredicted RBP19.5■□□□□ 0.71
PACS1-201ENST00000320580 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
PACS1-201ENST00000320580 PZPP20742 1482 aa19.5■□□□□ 0.71
PACS1-201ENST00000320580 GSDMDP57764 484 aa19.49■□□□□ 0.71
PACS1-201ENST00000320580 OTUD7AQ8TE49 926 aaPredicted RBP19.49■□□□□ 0.71
PACS1-201ENST00000320580 NAA30Q147X3 362 aaPredicted RBP19.49■□□□□ 0.71
PACS1-201ENST00000320580 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
PACS1-201ENST00000320580 MCM6Q14566 821 aa19.49■□□□□ 0.71
PACS1-201ENST00000320580 CCDC70Q6NSX1 233 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 KDM6BO15054 1643 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 IVLP07476 585 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 RUFY1Q96T51 708 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 ANO10Q9NW15 660 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 A0A1B0GUL7 405 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 PES1O00541 588 aaKnown RBP19.48■□□□□ 0.71
PACS1-201ENST00000320580 HNRNPH2P55795 449 aaKnown RBP19.48■□□□□ 0.71
PACS1-201ENST00000320580 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.48■□□□□ 0.71
PACS1-201ENST00000320580 DDX41Q9UJV9 622 aaKnown RBP19.48■□□□□ 0.71
PACS1-201ENST00000320580 GNAI3P08754 354 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms