RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 CANXP27824 592 aaKnown RBP40.21■■■■■ 4.03
NECTIN3-201ENST00000319792 SPATA31A5Q5VU36 1347 aa40.2■■■■■ 4.03
NECTIN3-201ENST00000319792 SPATA31A7Q8IWB4 1347 aa40.2■■■■■ 4.03
NECTIN3-201ENST00000319792 FRAT1Q92837 279 aaPredicted RBP40.2■■■■■ 4.03
NECTIN3-201ENST00000319792 SLC52A2Q9HAB3 445 aa40.2■■■■■ 4.03
NECTIN3-201ENST00000319792 BCL9LQ86UU0 1499 aa40.2■■■■■ 4.03
NECTIN3-201ENST00000319792 BTBD11A6QL63 1104 aa40.19■■■■■ 4.02
NECTIN3-201ENST00000319792 EXOC6Q8TAG9 804 aa40.19■■■■■ 4.02
NECTIN3-201ENST00000319792 UNC5CLQ8IV45 518 aa40.18■■■■■ 4.02
NECTIN3-201ENST00000319792 MRPL50Q8N5N7 158 aaKnown RBP40.18■■■■■ 4.02
NECTIN3-201ENST00000319792 CRBNQ96SW2 442 aa40.18■■■■■ 4.02
NECTIN3-201ENST00000319792 CDCA7Q9BWT1 371 aaPredicted RBP40.18■■■■■ 4.02
NECTIN3-201ENST00000319792 ZKSCAN2Q63HK3 967 aa40.17■■■■■ 4.02
NECTIN3-201ENST00000319792 FNBP4Q8N3X1 1017 aaPredicted RBP40.17■■■■■ 4.02
NECTIN3-201ENST00000319792 C8orf37Q96NL8 207 aa40.17■■■■■ 4.02
NECTIN3-201ENST00000319792 CACNA1FO60840 1977 aa40.17■■■■■ 4.02
NECTIN3-201ENST00000319792 NGLY1Q96IV0 654 aa40.16■■■■■ 4.02
NECTIN3-201ENST00000319792 EIF4A1P60842 406 aaKnown RBP40.15■■■■■ 4.02
NECTIN3-201ENST00000319792 TNS2Q63HR2 1409 aa40.14■■■■■ 4.02
NECTIN3-201ENST00000319792 TOGARAM1Q9Y4F4 1720 aa40.13■■■■■ 4.01
NECTIN3-201ENST00000319792 IPO8O15397 1037 aaKnown RBP40.11■■■■■ 4.01
NECTIN3-201ENST00000319792 NOB1Q9ULX3 412 aaKnown RBP40.11■■■■■ 4.01
NECTIN3-201ENST00000319792 HOXB7P09629 217 aa40.11■■■■■ 4.01
NECTIN3-201ENST00000319792 MS4A1P11836 297 aa40.11■■■■■ 4.01
NECTIN3-201ENST00000319792 VPS72Q15906 364 aa40.1■■■■■ 4.01
NECTIN3-201ENST00000319792 BARGINQ6ZT62 677 aa40.1■■■■■ 4.01
NECTIN3-201ENST00000319792 DDX54Q8TDD1 881 aaKnown RBP40.1■■■■■ 4.01
NECTIN3-201ENST00000319792 HEG1Q9ULI3 1381 aa40.1■■■■■ 4.01
NECTIN3-201ENST00000319792 ERVV-2B6SEH9 535 aa40.09■■■■■ 4.01
NECTIN3-201ENST00000319792 KCNQ3O43525 872 aa40.09■■■■■ 4.01
NECTIN3-201ENST00000319792 ATF7IPQ6VMQ6 1270 aa40.09■■■■■ 4.01
NECTIN3-201ENST00000319792 ARHGAP45Q92619 1136 aa40.09■■■■■ 4.01
NECTIN3-201ENST00000319792 NFATC2IPQ8NCF5 419 aa40.08■■■■■ 4.01
NECTIN3-201ENST00000319792 TRIM27P14373 513 aa40.06■■■■■ 4
NECTIN3-201ENST00000319792 PANK1Q8TE04 598 aa40.06■■■■■ 4
NECTIN3-201ENST00000319792 PAPPAQ13219 1627 aa40.06■■■■■ 4
NECTIN3-201ENST00000319792 TNNQ9UQP3 1299 aa40.06■■■■■ 4
NECTIN3-201ENST00000319792 CABP4P57796 275 aa40.05■■■■■ 4
NECTIN3-201ENST00000319792 EXOC5O00471 708 aa40.04■■■■■ 4
NECTIN3-201ENST00000319792 RLBP1P12271 317 aa40.04■■■■■ 4
NECTIN3-201ENST00000319792 DZIP1LQ8IYY4 767 aaKnown RBP40.04■■■■■ 4
NECTIN3-201ENST00000319792 TCERG1O14776 1098 aaKnown RBP40.03■■■■■ 4
NECTIN3-201ENST00000319792 ZNF790Q6PG37 636 aa40.02■■■■■ 4
NECTIN3-201ENST00000319792 UBR2Q8IWV8 1755 aa40.01■■■■■ 4
NECTIN3-201ENST00000319792 CCDC30Q5VVM6 783 aa40.01■■■■■ 4
NECTIN3-201ENST00000319792 CCDC9Q9Y3X0 531 aaKnown RBP40.01■■■■■ 4
NECTIN3-201ENST00000319792 ITGB4P16144 1822 aa40.01■■■■■ 4
NECTIN3-201ENST00000319792 CHMP4AQ9BY43 222 aa40.01■■■■□ 3.99
NECTIN3-201ENST00000319792 MEX3CQ5U5Q3 659 aaKnown RBP40■■■■□ 3.99
NECTIN3-201ENST00000319792 USP21Q9UK80 565 aa40■■■■□ 3.99
NECTIN3-201ENST00000319792 FTSJ3Q8IY81 847 aaKnown RBP39.99■■■■□ 3.99
NECTIN3-201ENST00000319792 CLUAP1Q96AJ1 413 aa39.98■■■■□ 3.99
NECTIN3-201ENST00000319792 C5P01031 1676 aa39.97■■■■□ 3.99
NECTIN3-201ENST00000319792 COG6Q9Y2V7 657 aa39.97■■■■□ 3.99
NECTIN3-201ENST00000319792 GLI3P10071 1580 aa39.97■■■■□ 3.99
NECTIN3-201ENST00000319792 GIGYF1O75420 1035 aaPredicted RBP39.96■■■■□ 3.99
NECTIN3-201ENST00000319792 SLC39A6Q13433 755 aa39.96■■■■□ 3.99
NECTIN3-201ENST00000319792 DDB1Q16531 1140 aa39.96■■■■□ 3.99
NECTIN3-201ENST00000319792 STK31Q9BXU1 1019 aa39.96■■■■□ 3.99
NECTIN3-201ENST00000319792 API5Q9BZZ5 524 aaKnown RBP39.95■■■■□ 3.99
NECTIN3-201ENST00000319792 PTPRCP08575 1304 aa39.94■■■■□ 3.98
NECTIN3-201ENST00000319792 SLC4A2P04920 1241 aa39.94■■■■□ 3.98
NECTIN3-201ENST00000319792 MVPQ14764 893 aaKnown RBP39.94■■■■□ 3.98
NECTIN3-201ENST00000319792 HDGFL1Q5TGJ6 251 aa39.94■■■■□ 3.98
NECTIN3-201ENST00000319792 B4GALNT3Q6L9W6 998 aa39.94■■■■□ 3.98
NECTIN3-201ENST00000319792 THSD7AQ9UPZ6 1657 aa39.93■■■■□ 3.98
NECTIN3-201ENST00000319792 RGS12O14924 1447 aa39.92■■■■□ 3.98
NECTIN3-201ENST00000319792 AAMPQ13685 434 aa39.92■■■■□ 3.98
NECTIN3-201ENST00000319792 ABCC4O15439 1325 aa39.92■■■■□ 3.98
NECTIN3-201ENST00000319792 DOT1LQ8TEK3 1739 aa39.91■■■■□ 3.98
NECTIN3-201ENST00000319792 TTC5Q8N0Z6 440 aa39.91■■■■□ 3.98
NECTIN3-201ENST00000319792 CCDC136Q96JN2 1154 aa39.91■■■■□ 3.98
NECTIN3-201ENST00000319792 AFF2P51816 1311 aa39.91■■■■□ 3.98
NECTIN3-201ENST00000319792 LAMB4A4D0S4 1761 aa39.91■■■■□ 3.98
NECTIN3-201ENST00000319792 ATRNO75882 1429 aa39.89■■■■□ 3.98
NECTIN3-201ENST00000319792 KCPQ6ZWJ8 1503 aa39.89■■■■□ 3.98
NECTIN3-201ENST00000319792 ZNF496Q96IT1 587 aaPredicted RBP39.88■■■■□ 3.97
NECTIN3-201ENST00000319792 TMEM57Q8N5G2 664 aa39.87■■■■□ 3.97
NECTIN3-201ENST00000319792 FMNL2Q96PY5 1086 aa39.87■■■■□ 3.97
NECTIN3-201ENST00000319792 TMOD3Q9NYL9 352 aa39.86■■■■□ 3.97
NECTIN3-201ENST00000319792 FAM98CQ17RN3 349 aaKnown RBP39.86■■■■□ 3.97
NECTIN3-201ENST00000319792 NECTIN2Q92692 538 aa39.85■■■■□ 3.97
NECTIN3-201ENST00000319792 G2E3Q7L622 706 aa39.84■■■■□ 3.97
NECTIN3-201ENST00000319792 DDX19BQ9UMR2 479 aa39.84■■■■□ 3.97
NECTIN3-201ENST00000319792 EIF2S2P20042 333 aaKnown RBP39.83■■■■□ 3.97
NECTIN3-201ENST00000319792 N4BP2Q86UW6 1770 aaPredicted RBP39.83■■■■□ 3.97
NECTIN3-201ENST00000319792 BCL9O00512 1426 aa39.83■■■■□ 3.97
NECTIN3-201ENST00000319792 MARCH10Q8NA82 808 aaPredicted RBP39.82■■■■□ 3.97
NECTIN3-201ENST00000319792 PRAMEF22A3QJZ6 481 aa39.81■■■■□ 3.96
NECTIN3-201ENST00000319792 SNRPA1P09661 255 aaKnown RBP39.81■■■■□ 3.96
NECTIN3-201ENST00000319792 ITPRIPQ8IWB1 547 aa39.81■■■■□ 3.96
NECTIN3-201ENST00000319792 FLIIQ13045 1269 aa39.8■■■■□ 3.96
NECTIN3-201ENST00000319792 KAT6BQ8WYB5 2073 aa39.79■■■■□ 3.96
NECTIN3-201ENST00000319792 PIGBQ92521 554 aa39.79■■■■□ 3.96
NECTIN3-201ENST00000319792 CHPF2Q9P2E5 772 aa39.79■■■■□ 3.96
NECTIN3-201ENST00000319792 GJD4Q96KN9 370 aaPredicted RBP39.78■■■■□ 3.96
NECTIN3-201ENST00000319792 DBF4Q9UBU7 674 aaPredicted RBP39.78■■■■□ 3.96
NECTIN3-201ENST00000319792 TRPC5Q9UL62 973 aaPredicted RBP39.78■■■■□ 3.96
NECTIN3-201ENST00000319792 INTS3Q68E01 1043 aaKnown RBP39.75■■■■□ 3.95
NECTIN3-201ENST00000319792 PXDNLA1KZ92 1463 aa39.73■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms