RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 PAXBP1Q9Y5B6 917 aa14.1□□□□□ -0.15
FARP1-201ENST00000319562 DYNC1I1O14576 645 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 GTF2F1P35269 517 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■■□ 23.7
FARP1-201ENST00000319562 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
FARP1-201ENST00000319562 CWC27Q6UX04 472 aaKnown RBP14.09□□□□□ -0.15
FARP1-201ENST00000319562 EXOSC9Q06265 439 aaKnown RBP14.09□□□□□ -0.15
FARP1-201ENST00000319562 AACSQ86V21 672 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 MYOM3Q5VTT5 1437 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 FERMT1Q9BQL6 677 aa14.09□□□□□ -0.15
FARP1-201ENST00000319562 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.15
FARP1-201ENST00000319562 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.15
FARP1-201ENST00000319562 CETN1Q12798 172 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.08□□□□□ -0.164e-7■■■□□ 16.6
FARP1-201ENST00000319562 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
FARP1-201ENST00000319562 TSNARE1Q96NA8 513 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 PPP4R3BQ5MIZ7 849 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 EHBP1Q8NDI1 1231 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 SIL1Q9H173 461 aa14.08□□□□□ -0.16
FARP1-201ENST00000319562 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
FARP1-201ENST00000319562 LMAN1P49257 510 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 KLHL10Q6JEL2 608 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
FARP1-201ENST00000319562 IKBKGQ9Y6K9 419 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 HSF2BPO75031 334 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
FARP1-201ENST00000319562 NSRP1Q9H0G5 558 aaKnown RBP14.07□□□□□ -0.16
FARP1-201ENST00000319562 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 NLRP6P59044 892 aa14.07□□□□□ -0.16
FARP1-201ENST00000319562 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
FARP1-201ENST00000319562 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 CAVIN2O95810 425 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 C16orf45Q96MC5 204 aaPredicted RBP14.06□□□□□ -0.16
FARP1-201ENST00000319562 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 CCDC155Q8N6L0 562 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 COMMD10Q9Y6G5 202 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 HMGB1P09429 215 aaKnown RBP14.06□□□□□ -0.16
FARP1-201ENST00000319562 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
FARP1-201ENST00000319562 PRIMPOLQ96LW4 560 aa14.06□□□□□ -0.16
FARP1-201ENST00000319562 MAATS1Q7Z4T9 603 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■□□ 16.5
FARP1-201ENST00000319562 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
FARP1-201ENST00000319562 MACROD2A1Z1Q3 448 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
FARP1-201ENST00000319562 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 PPP1R14CQ8TAE6 165 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 USP5P45974 858 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 FAM114A1Q8IWE2 563 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
FARP1-201ENST00000319562 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
FARP1-201ENST00000319562 TDRD12Q587J7 1177 aaKnown RBP14.05□□□□□ -0.16
FARP1-201ENST00000319562 CKAP4Q07065 602 aaKnown RBP14.04□□□□□ -0.16
FARP1-201ENST00000319562 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 CCDC6Q16204 474 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 AKNAQ7Z591 1439 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 STX1AQ16623 288 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 CEP126Q9P2H0 1117 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 PPP2R1AP30153 589 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 LRP2BPQ9P2M1 347 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 SEPT6Q14141 434 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 PLVAPQ9BX97 442 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 ZWINTO95229 277 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 CABP2Q9NPB3 220 aa14.04□□□□□ -0.16
FARP1-201ENST00000319562 C8orf76Q96K31 380 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 PABPN1LA6NDY0 278 aaKnown RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 NBPF1Q3BBV0 1214 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 CNNM3Q8NE01 707 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 RAB11FIP3O75154 756 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 KRT222Q8N1A0 295 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 RBM25P49756 843 aaKnown RBP14.03□□□□□ -0.16
FARP1-201ENST00000319562 TRERF1Q96PN7 1200 aa14.03□□□□□ -0.16
FARP1-201ENST00000319562 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.16
FARP1-201ENST00000319562 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.16
FARP1-201ENST00000319562 AMPD3Q01432 767 aa14.02□□□□□ -0.16
FARP1-201ENST00000319562 STMN4Q9H169 189 aaPredicted RBP14.02□□□□□ -0.16
FARP1-201ENST00000319562 TRMT1Q9NXH9 659 aaKnown RBP14.02□□□□□ -0.16
FARP1-201ENST00000319562 CEP135Q66GS9 1140 aa14.02□□□□□ -0.16
FARP1-201ENST00000319562 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
FARP1-201ENST00000319562 JADE2Q9NQC1 790 aa14.02□□□□□ -0.17
FARP1-201ENST00000319562 CABP4P57796 275 aa14.02□□□□□ -0.17
FARP1-201ENST00000319562 KANK3Q6NY19 840 aa14.02□□□□□ -0.17
FARP1-201ENST00000319562 ACTN2P35609 894 aa14.01□□□□□ -0.17
FARP1-201ENST00000319562 DNA2P51530 1060 aa14.01□□□□□ -0.17
FARP1-201ENST00000319562 MSL1Q68DK7 614 aa14.01□□□□□ -0.17
FARP1-201ENST00000319562 NAP1L3Q99457 506 aaPredicted RBP14.01□□□□□ -0.17
FARP1-201ENST00000319562 ARFGAP3Q9NP61 516 aa14.01□□□□□ -0.17
FARP1-201ENST00000319562 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms