RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 HMMRO75330 724 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 MBD3O95983 291 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 NAA30Q147X3 362 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-201ENST00000318607 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 NECAB1Q8N987 351 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
PABPC1-201ENST00000318607 COG3Q96JB2 828 aa17.14■□□□□ 0.33
PABPC1-201ENST00000318607 TFIP11Q9UBB9 837 aaKnown RBP17.14■□□□□ 0.33
PABPC1-201ENST00000318607 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
PABPC1-201ENST00000318607 ANXA1P04083 346 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
PABPC1-201ENST00000318607 ASXL2Q76L83 1435 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
PABPC1-201ENST00000318607 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-201ENST00000318607 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 POGZQ7Z3K3 1410 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 ZNF500O60304 480 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-201ENST00000318607 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
PABPC1-201ENST00000318607 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
PABPC1-201ENST00000318607 MSH6P52701 1360 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 IL25Q9H293 177 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 A0A087WWV3 80 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
PABPC1-201ENST00000318607 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
PABPC1-201ENST00000318607 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
PABPC1-201ENST00000318607 MX1P20591 662 aa17.1■□□□□ 0.33
PABPC1-201ENST00000318607 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
PABPC1-201ENST00000318607 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
PABPC1-201ENST00000318607 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
PABPC1-201ENST00000318607 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
PABPC1-201ENST00000318607 ERICH4A6NGS2 130 aa17.09■□□□□ 0.33
PABPC1-201ENST00000318607 LRMPQ12912 555 aa17.09■□□□□ 0.33
PABPC1-201ENST00000318607 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
PABPC1-201ENST00000318607 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
PABPC1-201ENST00000318607 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.33
PABPC1-201ENST00000318607 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.33
PABPC1-201ENST00000318607 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.33
PABPC1-201ENST00000318607 PHF14O94880 888 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 PTGS1P23219 599 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 ZBTB22O15209 634 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 TRIM5Q9C035 493 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
PABPC1-201ENST00000318607 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
PABPC1-201ENST00000318607 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
PABPC1-201ENST00000318607 CYP2E1P05181 493 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-201ENST00000318607 CCDC94Q9BW85 323 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-201ENST00000318607 TRMT1Q9NXH9 659 aaKnown RBP17.06■□□□□ 0.32
PABPC1-201ENST00000318607 IL16Q14005 1332 aa17.06■□□□□ 0.32
PABPC1-201ENST00000318607 CLTCL1P53675 1640 aa17.06■□□□□ 0.32
PABPC1-201ENST00000318607 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
PABPC1-201ENST00000318607 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
PABPC1-201ENST00000318607 GNAI2P04899 355 aa17.06■□□□□ 0.32
PABPC1-201ENST00000318607 ARHGAP31Q2M1Z3 1444 aa17.05■□□□□ 0.32
PABPC1-201ENST00000318607 KDM4AO75164 1064 aa17.05■□□□□ 0.32
PABPC1-201ENST00000318607 BRD1O95696 1058 aa17.05■□□□□ 0.32
PABPC1-201ENST00000318607 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
PABPC1-201ENST00000318607 ABCC4O15439 1325 aa17.05■□□□□ 0.32
PABPC1-201ENST00000318607 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
PABPC1-201ENST00000318607 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
PABPC1-201ENST00000318607 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
PABPC1-201ENST00000318607 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 TRPM2O94759 1503 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 SYT1P21579 422 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
PABPC1-201ENST00000318607 CHMLP26374 656 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 AK2P54819 239 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
PABPC1-201ENST00000318607 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 MYRIPQ8NFW9 859 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 SPATA31D1Q6ZQQ2 1576 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 PPLO60437 1756 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 BICD2Q8TD16 824 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
PABPC1-201ENST00000318607 STX6O43752 255 aa17.02■□□□□ 0.32
PABPC1-201ENST00000318607 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
PABPC1-201ENST00000318607 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
PABPC1-201ENST00000318607 LARGE1O95461 756 aa17.02■□□□□ 0.32
PABPC1-201ENST00000318607 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
PABPC1-201ENST00000318607 SRGAP3O43295 1099 aa17.02■□□□□ 0.31
PABPC1-201ENST00000318607 GJB2P29033 226 aa17.02■□□□□ 0.31
PABPC1-201ENST00000318607 CCDC183Q5T5S1 534 aa17.02■□□□□ 0.31
PABPC1-201ENST00000318607 IL13P35225 146 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms