RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
SYCN-201ENST00000318438 KCNA3P22001 575 aa18.7■□□□□ 0.58
SYCN-201ENST00000318438 COG3Q96JB2 828 aa18.7■□□□□ 0.58
SYCN-201ENST00000318438 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
SYCN-201ENST00000318438 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
SYCN-201ENST00000318438 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
SYCN-201ENST00000318438 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
SYCN-201ENST00000318438 ITGB4P16144 1822 aa18.67■□□□□ 0.58
SYCN-201ENST00000318438 TMF1P82094 1093 aa18.67■□□□□ 0.58
SYCN-201ENST00000318438 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
SYCN-201ENST00000318438 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
SYCN-201ENST00000318438 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
SYCN-201ENST00000318438 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
SYCN-201ENST00000318438 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
SYCN-201ENST00000318438 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
SYCN-201ENST00000318438 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
SYCN-201ENST00000318438 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
SYCN-201ENST00000318438 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
SYCN-201ENST00000318438 C4AP0C0L4 1744 aa18.64■□□□□ 0.57
SYCN-201ENST00000318438 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
SYCN-201ENST00000318438 TRAPPC3LQ5T215 181 aa18.64■□□□□ 0.57
SYCN-201ENST00000318438 ARFGEF1Q9Y6D6 1849 aa18.63■□□□□ 0.57
SYCN-201ENST00000318438 RTCBQ9Y3I0 505 aaKnown RBP18.63■□□□□ 0.57
SYCN-201ENST00000318438 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
SYCN-201ENST00000318438 GYS1P13807 737 aa18.62■□□□□ 0.57
SYCN-201ENST00000318438 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
SYCN-201ENST00000318438 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
SYCN-201ENST00000318438 FOXN1O15353 648 aa18.6■□□□□ 0.57
SYCN-201ENST00000318438 VEGFAP15692 232 aaPredicted RBP18.6■□□□□ 0.57
SYCN-201ENST00000318438 RASSF7Q02833 373 aa18.6■□□□□ 0.57
SYCN-201ENST00000318438 NKX1-1Q15270 411 aaPredicted RBP18.6■□□□□ 0.57
SYCN-201ENST00000318438 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
SYCN-201ENST00000318438 CHRNA5P30532 468 aa18.59■□□□□ 0.57
SYCN-201ENST00000318438 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
SYCN-201ENST00000318438 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
SYCN-201ENST00000318438 RFC4P35249 363 aa18.58■□□□□ 0.56
SYCN-201ENST00000318438 ATG3Q9NT62 314 aa18.58■□□□□ 0.56
SYCN-201ENST00000318438 INSRP06213 1382 aa18.57■□□□□ 0.56
SYCN-201ENST00000318438 GLTPD2A6NH11 291 aa18.57■□□□□ 0.56
SYCN-201ENST00000318438 NEUROD1Q13562 356 aa18.57■□□□□ 0.56
SYCN-201ENST00000318438 SBF1O95248 1867 aa18.56■□□□□ 0.56
SYCN-201ENST00000318438 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
SYCN-201ENST00000318438 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
SYCN-201ENST00000318438 KDRP35968 1356 aa18.55■□□□□ 0.56
SYCN-201ENST00000318438 ZC3H4Q9UPT8 1303 aaKnown RBP18.55■□□□□ 0.56
SYCN-201ENST00000318438 ADRA2BP18089 450 aa18.55■□□□□ 0.56
SYCN-201ENST00000318438 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
SYCN-201ENST00000318438 PRDM10Q9NQV6 1147 aa18.55■□□□□ 0.56
SYCN-201ENST00000318438 KDM6AO15550 1401 aaPredicted RBP18.55■□□□□ 0.56
SYCN-201ENST00000318438 DDR1Q08345 913 aa18.54■□□□□ 0.56
SYCN-201ENST00000318438 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
SYCN-201ENST00000318438 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
SYCN-201ENST00000318438 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
SYCN-201ENST00000318438 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
SYCN-201ENST00000318438 FLT4P35916 1363 aa18.53■□□□□ 0.56
SYCN-201ENST00000318438 POTECB2RU33 542 aa18.52■□□□□ 0.56
SYCN-201ENST00000318438 RPS6KA4O75676 772 aa18.52■□□□□ 0.56
SYCN-201ENST00000318438 LMNB1P20700 586 aa18.52■□□□□ 0.56
SYCN-201ENST00000318438 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
SYCN-201ENST00000318438 CREBZFQ9NS37 354 aa18.52■□□□□ 0.56
SYCN-201ENST00000318438 FYB1O15117 783 aa18.51■□□□□ 0.55
SYCN-201ENST00000318438 FKBP8Q14318 412 aa18.51■□□□□ 0.55
SYCN-201ENST00000318438 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
SYCN-201ENST00000318438 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
SYCN-201ENST00000318438 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
SYCN-201ENST00000318438 PHKG2P15735 406 aa18.49■□□□□ 0.55
SYCN-201ENST00000318438 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
SYCN-201ENST00000318438 CNTNAP1P78357 1384 aa18.48■□□□□ 0.55
SYCN-201ENST00000318438 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
SYCN-201ENST00000318438 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
SYCN-201ENST00000318438 ABHD8Q96I13 439 aa18.48■□□□□ 0.55
SYCN-201ENST00000318438 COL5A3P25940 1745 aaPredicted RBP18.47■□□□□ 0.55
SYCN-201ENST00000318438 LBX1P52954 281 aa18.47■□□□□ 0.55
SYCN-201ENST00000318438 IFNL2Q8IZJ0 200 aa18.47■□□□□ 0.55
SYCN-201ENST00000318438 USP42Q9H9J4 1324 aaKnown RBP18.47■□□□□ 0.55
SYCN-201ENST00000318438 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
SYCN-201ENST00000318438 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
SYCN-201ENST00000318438 POTEIP0CG38 1075 aa18.46■□□□□ 0.55
SYCN-201ENST00000318438 POTEJP0CG39 1038 aa18.46■□□□□ 0.55
SYCN-201ENST00000318438 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
SYCN-201ENST00000318438 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
SYCN-201ENST00000318438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
SYCN-201ENST00000318438 KIF24Q5T7B8 1368 aa18.44■□□□□ 0.54
SYCN-201ENST00000318438 NFKBIEO00221 500 aa18.44■□□□□ 0.54
SYCN-201ENST00000318438 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
SYCN-201ENST00000318438 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
SYCN-201ENST00000318438 VEGFBP49765 207 aa18.43■□□□□ 0.54
SYCN-201ENST00000318438 MLLT1Q03111 559 aaPredicted RBP18.43■□□□□ 0.54
SYCN-201ENST00000318438 PPM1GO15355 546 aaPredicted RBP18.42■□□□□ 0.54
SYCN-201ENST00000318438 TM4SF1P30408 202 aa18.42■□□□□ 0.54
SYCN-201ENST00000318438 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
SYCN-201ENST00000318438 DPY19L2Q6NUT2 758 aa18.42■□□□□ 0.54
SYCN-201ENST00000318438 EYA1Q99502 592 aa18.42■□□□□ 0.54
SYCN-201ENST00000318438 WBP1LQ9NX94 342 aa18.42■□□□□ 0.54
SYCN-201ENST00000318438 TESK2Q96S53 571 aa18.41■□□□□ 0.54
SYCN-201ENST00000318438 PTCD1O75127 700 aaKnown RBP18.4■□□□□ 0.54
SYCN-201ENST00000318438 HSPA8P11142 646 aaKnown RBP18.39■□□□□ 0.53
SYCN-201ENST00000318438 TTLL6Q8N841 843 aa18.39■□□□□ 0.53
SYCN-201ENST00000318438 CCDC85CA6NKD9 419 aa18.38■□□□□ 0.53
SYCN-201ENST00000318438 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms