RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 PLEKHG2Q9H7P9 1386 aa20.08■□□□□ 0.81
CALR-201ENST00000316448 IL2RBP14784 551 aa20.08■□□□□ 0.81
CALR-201ENST00000316448 CENPQQ7L2Z9 268 aaPredicted RBP20.08■□□□□ 0.81
CALR-201ENST00000316448 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
CALR-201ENST00000316448 ZCRB1Q8TBF4 217 aaKnown RBP20.08■□□□□ 0.81
CALR-201ENST00000316448 ARHGAP45Q92619 1136 aa20.08■□□□□ 0.81
CALR-201ENST00000316448 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.8
CALR-201ENST00000316448 G2E3Q7L622 706 aa20.07■□□□□ 0.8
CALR-201ENST00000316448 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
CALR-201ENST00000316448 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
CALR-201ENST00000316448 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 MS4A1P11836 297 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 AAMPQ13685 434 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 PCDHB15Q9Y5E8 787 aa20.06■□□□□ 0.8
CALR-201ENST00000316448 SCN11AQ9UI33 1791 aa20.05■□□□□ 0.8
CALR-201ENST00000316448 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
CALR-201ENST00000316448 DCAF5Q96JK2 942 aa20.04■□□□□ 0.8
CALR-201ENST00000316448 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
CALR-201ENST00000316448 RGS12O14924 1447 aa20.04■□□□□ 0.8
CALR-201ENST00000316448 IGHDP01880 384 aa20.04■□□□□ 0.8
CALR-201ENST00000316448 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
CALR-201ENST00000316448 ABCC4O15439 1325 aa20.03■□□□□ 0.8
CALR-201ENST00000316448 PRAMEF22A3QJZ6 481 aa20.02■□□□□ 0.8
CALR-201ENST00000316448 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
CALR-201ENST00000316448 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
CALR-201ENST00000316448 SKAP1Q86WV1 359 aa20.02■□□□□ 0.79
CALR-201ENST00000316448 SHANK3Q9BYB0 1731 aa20.01■□□□□ 0.79
CALR-201ENST00000316448 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
CALR-201ENST00000316448 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
CALR-201ENST00000316448 API5Q9BZZ5 524 aaKnown RBP20.01■□□□□ 0.79
CALR-201ENST00000316448 DISP2A7MBM2 1401 aa20.01■□□□□ 0.79
CALR-201ENST00000316448 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
CALR-201ENST00000316448 NKX1-1Q15270 411 aaPredicted RBP20■□□□□ 0.79
CALR-201ENST00000316448 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
CALR-201ENST00000316448 DDX19BQ9UMR2 479 aa20■□□□□ 0.79
CALR-201ENST00000316448 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
CALR-201ENST00000316448 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
CALR-201ENST00000316448 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
CALR-201ENST00000316448 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
CALR-201ENST00000316448 MRC1P22897 1456 aa19.99■□□□□ 0.79
CALR-201ENST00000316448 GIGYF1O75420 1035 aaPredicted RBP19.99■□□□□ 0.79
CALR-201ENST00000316448 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
CALR-201ENST00000316448 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
CALR-201ENST00000316448 ZBTB7BO15156 539 aaPredicted RBP19.98■□□□□ 0.79
CALR-201ENST00000316448 JCADQ9P266 1359 aa19.98■□□□□ 0.79
CALR-201ENST00000316448 NRAPQ86VF7 1730 aa19.98■□□□□ 0.79
CALR-201ENST00000316448 CABP4P57796 275 aa19.98■□□□□ 0.79
CALR-201ENST00000316448 HOXB7P09629 217 aa19.97■□□□□ 0.79
CALR-201ENST00000316448 STK31Q9BXU1 1019 aa19.97■□□□□ 0.79
CALR-201ENST00000316448 PTPRCP08575 1304 aa19.97■□□□□ 0.79
CALR-201ENST00000316448 SLIT2O94813 1529 aa19.96■□□□□ 0.79
CALR-201ENST00000316448 F6X3S4 739 aa19.96■□□□□ 0.79
CALR-201ENST00000316448 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
CALR-201ENST00000316448 INTS3Q68E01 1043 aaKnown RBP19.96■□□□□ 0.79
CALR-201ENST00000316448 SPATA31A1Q5TZJ5 1347 aa19.96■□□□□ 0.79
CALR-201ENST00000316448 ANXA1P04083 346 aa19.95■□□□□ 0.78
CALR-201ENST00000316448 HSPA1LP34931 641 aa19.95■□□□□ 0.78
CALR-201ENST00000316448 FLIIQ13045 1269 aa19.95■□□□□ 0.78
CALR-201ENST00000316448 ZNF496Q96IT1 587 aaPredicted RBP19.95■□□□□ 0.78
CALR-201ENST00000316448 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
CALR-201ENST00000316448 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
CALR-201ENST00000316448 SPATA31A5Q5VU36 1347 aa19.92■□□□□ 0.78
CALR-201ENST00000316448 SPATA31A7Q8IWB4 1347 aa19.92■□□□□ 0.78
CALR-201ENST00000316448 PROSER3Q2NL68 480 aa19.92■□□□□ 0.78
CALR-201ENST00000316448 C8orf37Q96NL8 207 aa19.92■□□□□ 0.78
CALR-201ENST00000316448 C1orf115Q9H7X2 142 aa19.92■□□□□ 0.78
CALR-201ENST00000316448 LRP6O75581 1613 aa19.91■□□□□ 0.78
CALR-201ENST00000316448 TOGARAM1Q9Y4F4 1720 aa19.91■□□□□ 0.78
CALR-201ENST00000316448 FKBP5Q13451 457 aaPredicted RBP19.9■□□□□ 0.78
CALR-201ENST00000316448 PDIA6Q15084 440 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 EXOC5O00471 708 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 NGLY1Q96IV0 654 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 USP16Q9Y5T5 823 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 BCL9LQ86UU0 1499 aa19.9■□□□□ 0.78
CALR-201ENST00000316448 SLC4A10Q6U841 1118 aa19.89■□□□□ 0.77
CALR-201ENST00000316448 NWD2Q9ULI1 1742 aa19.89■□□□□ 0.77
CALR-201ENST00000316448 C5P01031 1676 aa19.88■□□□□ 0.77
CALR-201ENST00000316448 THRAP3Q9Y2W1 955 aaKnown RBP19.88■□□□□ 0.77
CALR-201ENST00000316448 CACNA1FO60840 1977 aa19.88■□□□□ 0.77
CALR-201ENST00000316448 TTC5Q8N0Z6 440 aa19.88■□□□□ 0.77
CALR-201ENST00000316448 GLI3P10071 1580 aa19.88■□□□□ 0.77
CALR-201ENST00000316448 WNK3Q9BYP7 1800 aa19.87■□□□□ 0.77
CALR-201ENST00000316448 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
CALR-201ENST00000316448 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
CALR-201ENST00000316448 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
CALR-201ENST00000316448 CCDC9Q9Y3X0 531 aaKnown RBP19.87■□□□□ 0.77
CALR-201ENST00000316448 SPATA31A6Q5VVP1 1343 aa19.87■□□□□ 0.77
CALR-201ENST00000316448 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
CALR-201ENST00000316448 SIRT2Q8IXJ6 389 aa19.86■□□□□ 0.77
CALR-201ENST00000316448 PIGBQ92521 554 aa19.86■□□□□ 0.77
CALR-201ENST00000316448 MEIS3Q99687 375 aa19.86■□□□□ 0.77
CALR-201ENST00000316448 RWDD1Q9H446 243 aaPredicted RBP19.86■□□□□ 0.77
CALR-201ENST00000316448 HDAC1Q13547 482 aaPredicted RBP19.86■□□□□ 0.77
CALR-201ENST00000316448 BACH2Q9BYV9 841 aa19.86■□□□□ 0.77
CALR-201ENST00000316448 PDE4AP27815 886 aa19.85■□□□□ 0.77
CALR-201ENST00000316448 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
CALR-201ENST00000316448 BARGINQ6ZT62 677 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms