RNA–Protein interactions for RNA: ENST00000315626.5

CCL25-202, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 2 BASIC

Gene CCL25, Length 450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-202ENST00000315626 HSPA1AP0DMV8 641 aaKnown RBP17.52■□□□□ 0.4
CCL25-202ENST00000315626 HSPA1BP0DMV9 641 aaKnown RBP17.52■□□□□ 0.4
CCL25-202ENST00000315626 SIK1P57059 783 aa17.52■□□□□ 0.4
CCL25-202ENST00000315626 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
CCL25-202ENST00000315626 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.39
CCL25-202ENST00000315626 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
CCL25-202ENST00000315626 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CCL25-202ENST00000315626 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
CCL25-202ENST00000315626 KCNA3P22001 575 aa17.49■□□□□ 0.39
CCL25-202ENST00000315626 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
CCL25-202ENST00000315626 FYB1O15117 783 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 ATP6V1AP38606 617 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 SMC1BQ8NDV3 1235 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 ITGB4P16144 1822 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 KIF13BQ9NQT8 1826 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
CCL25-202ENST00000315626 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
CCL25-202ENST00000315626 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
CCL25-202ENST00000315626 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
CCL25-202ENST00000315626 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
CCL25-202ENST00000315626 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
CCL25-202ENST00000315626 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
CCL25-202ENST00000315626 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
CCL25-202ENST00000315626 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
CCL25-202ENST00000315626 SLC34A2O95436 690 aa17.45■□□□□ 0.38
CCL25-202ENST00000315626 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
CCL25-202ENST00000315626 ARHGEF1Q92888 912 aaKnown RBP17.44■□□□□ 0.38
CCL25-202ENST00000315626 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CCL25-202ENST00000315626 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
CCL25-202ENST00000315626 SMG6Q86US8 1419 aaKnown RBP17.44■□□□□ 0.38
CCL25-202ENST00000315626 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
CCL25-202ENST00000315626 GYS1P13807 737 aa17.42■□□□□ 0.38
CCL25-202ENST00000315626 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
CCL25-202ENST00000315626 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
CCL25-202ENST00000315626 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
CCL25-202ENST00000315626 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
CCL25-202ENST00000315626 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
CCL25-202ENST00000315626 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
CCL25-202ENST00000315626 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
CCL25-202ENST00000315626 INSRP06213 1382 aa17.4■□□□□ 0.38
CCL25-202ENST00000315626 PKD1L3Q7Z443 1732 aa17.4■□□□□ 0.38
CCL25-202ENST00000315626 SLC4A9Q96Q91 983 aa17.39■□□□□ 0.37
CCL25-202ENST00000315626 FLT4P35916 1363 aa17.39■□□□□ 0.37
CCL25-202ENST00000315626 KIF20BQ96Q89 1820 aa17.38■□□□□ 0.37
CCL25-202ENST00000315626 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
CCL25-202ENST00000315626 CHRNA5P30532 468 aa17.38■□□□□ 0.37
CCL25-202ENST00000315626 RFC4P35249 363 aa17.38■□□□□ 0.37
CCL25-202ENST00000315626 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
CCL25-202ENST00000315626 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
CCL25-202ENST00000315626 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
CCL25-202ENST00000315626 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
CCL25-202ENST00000315626 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCL25-202ENST00000315626 RASSF7Q02833 373 aa17.36■□□□□ 0.37
CCL25-202ENST00000315626 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
CCL25-202ENST00000315626 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
CCL25-202ENST00000315626 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
CCL25-202ENST00000315626 ADRA2BP18089 450 aa17.35■□□□□ 0.37
CCL25-202ENST00000315626 SBF1O95248 1867 aa17.35■□□□□ 0.37
CCL25-202ENST00000315626 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
CCL25-202ENST00000315626 DDR1Q08345 913 aa17.34■□□□□ 0.37
CCL25-202ENST00000315626 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
CCL25-202ENST00000315626 KDRP35968 1356 aa17.33■□□□□ 0.36
CCL25-202ENST00000315626 PHKG2P15735 406 aa17.33■□□□□ 0.36
CCL25-202ENST00000315626 FKBP8Q14318 412 aa17.33■□□□□ 0.36
CCL25-202ENST00000315626 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.36
CCL25-202ENST00000315626 MKRN1Q9UHC7 482 aaKnown RBP17.33■□□□□ 0.36
CCL25-202ENST00000315626 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
CCL25-202ENST00000315626 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
CCL25-202ENST00000315626 POTECB2RU33 542 aa17.32■□□□□ 0.36
CCL25-202ENST00000315626 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
CCL25-202ENST00000315626 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
CCL25-202ENST00000315626 FOXN1O15353 648 aa17.31■□□□□ 0.36
CCL25-202ENST00000315626 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
CCL25-202ENST00000315626 LMNB1P20700 586 aa17.3■□□□□ 0.36
CCL25-202ENST00000315626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCL25-202ENST00000315626 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
CCL25-202ENST00000315626 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
CCL25-202ENST00000315626 EYA1Q99502 592 aa17.29■□□□□ 0.36
CCL25-202ENST00000315626 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
CCL25-202ENST00000315626 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
CCL25-202ENST00000315626 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
CCL25-202ENST00000315626 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
CCL25-202ENST00000315626 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
CCL25-202ENST00000315626 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
CCL25-202ENST00000315626 TM4SF1P30408 202 aa17.26■□□□□ 0.35
CCL25-202ENST00000315626 ANKRD26Q9UPS8 1709 aa17.26■□□□□ 0.35
CCL25-202ENST00000315626 USP42Q9H9J4 1324 aaKnown RBP17.25■□□□□ 0.35
CCL25-202ENST00000315626 CRKLP46109 303 aaKnown RBP17.25■□□□□ 0.35
CCL25-202ENST00000315626 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
CCL25-202ENST00000315626 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
CCL25-202ENST00000315626 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
CCL25-202ENST00000315626 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
CCL25-202ENST00000315626 HSPA5P11021 654 aaKnown RBP17.24■□□□□ 0.35
CCL25-202ENST00000315626 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
CCL25-202ENST00000315626 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
CCL25-202ENST00000315626 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
CCL25-202ENST00000315626 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
CCL25-202ENST00000315626 NFKBIEO00221 500 aa17.22■□□□□ 0.35
CCL25-202ENST00000315626 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms