RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 ARHGAP45Q92619 1136 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 CAMSAP1Q5T5Y3 1602 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 PDIA4P13667 645 aaKnown RBP11.13□□□□□ -0.63
XCR1-201ENST00000309285 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
XCR1-201ENST00000309285 CWC15Q9P013 229 aaKnown RBP11.13□□□□□ -0.63
XCR1-201ENST00000309285 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
XCR1-201ENST00000309285 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
XCR1-201ENST00000309285 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 PRR36Q9H6K5 1346 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
XCR1-201ENST00000309285 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
XCR1-201ENST00000309285 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
XCR1-201ENST00000309285 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 SIRT1Q96EB6 747 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 EYA1Q99502 592 aa11.12□□□□□ -0.63
XCR1-201ENST00000309285 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 BECN2A8MW95 431 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 REC8O95072 547 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 TULP4Q9NRJ4 1543 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
XCR1-201ENST00000309285 VPS37DQ86XT2 251 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 CLCN1P35523 988 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
XCR1-201ENST00000309285 ARGLU1Q9NWB6 273 aaPredicted RBP11.11□□□□□ -0.63
XCR1-201ENST00000309285 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
XCR1-201ENST00000309285 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
XCR1-201ENST00000309285 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 EXOC6BQ9Y2D4 811 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 SURF6O75683 361 aaKnown RBP11.1□□□□□ -0.63
XCR1-201ENST00000309285 TPM3P06753 285 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 KIAA1210Q9ULL0 1709 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 ADGRB1O14514 1584 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
XCR1-201ENST00000309285 NUCB2P80303 420 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 CEP89Q96ST8 783 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 FLT4P35916 1363 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
XCR1-201ENST00000309285 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 NUCB1Q02818 461 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 MNS1Q8NEH6 495 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 MEIS3Q99687 375 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 MROH2AA6NES4 1674 aa11.09□□□□□ -0.63
XCR1-201ENST00000309285 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
XCR1-201ENST00000309285 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
XCR1-201ENST00000309285 FLIIQ13045 1269 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 IFIT2P09913 472 aaKnown RBP11.08□□□□□ -0.64
XCR1-201ENST00000309285 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
XCR1-201ENST00000309285 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 SYNE3Q6ZMZ3 975 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 ATP7BP35670 1465 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
XCR1-201ENST00000309285 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
XCR1-201ENST00000309285 DDX58O95786 925 aaKnown RBP11.07□□□□□ -0.64
XCR1-201ENST00000309285 PTPRCP08575 1304 aa11.07□□□□□ -0.64
XCR1-201ENST00000309285 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
XCR1-201ENST00000309285 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
XCR1-201ENST00000309285 PTPRMP28827 1452 aa11.07□□□□□ -0.64
XCR1-201ENST00000309285 H0YHG0 523 aa11.07□□□□□ -0.64
XCR1-201ENST00000309285 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
XCR1-201ENST00000309285 LRRCC1Q9C099 1032 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 CHL1O00533 1208 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 CPLX2Q6PUV4 134 aaKnown RBP11.06□□□□□ -0.64
XCR1-201ENST00000309285 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 SPC24Q8NBT2 197 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 NEUROD6Q96NK8 337 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 IL1RAPL2Q9NP60 686 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 PIK3C2BO00750 1634 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 CPLX1O14810 134 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 PANK2Q9BZ23 570 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 CTDP1Q9Y5B0 961 aaPredicted RBP11.06□□□□□ -0.64
XCR1-201ENST00000309285 HOXC9P31274 260 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
XCR1-201ENST00000309285 SASS6Q6UVJ0 657 aa11.06□□□□□ -0.64
XCR1-201ENST00000309285 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 AATKQ6ZMQ8 1374 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 PLEKHG1Q9ULL1 1385 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
XCR1-201ENST00000309285 FOSBP53539 338 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
XCR1-201ENST00000309285 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
XCR1-201ENST00000309285 TCEAL9Q9UHQ7 104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms