RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 KIF2AO00139 706 aaPredicted RBP17.99■□□□□ 0.47
LEMD3-201ENST00000308330 SURF6O75683 361 aaKnown RBP17.99■□□□□ 0.47
LEMD3-201ENST00000308330 NAP1L1P55209 391 aaKnown RBP17.99■□□□□ 0.47
LEMD3-201ENST00000308330 NOLC1Q14978 699 aaKnown RBP eCLIP17.99■□□□□ 0.47
LEMD3-201ENST00000308330 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 NEBLO76041 1014 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
LEMD3-201ENST00000308330 BRMS1Q9HCU9 246 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 PRDM4Q9UKN5 801 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
LEMD3-201ENST00000308330 RUFY2Q8WXA3 655 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 KCNA6P17658 529 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 LRRFIP2Q9Y608 721 aaKnown RBP17.98■□□□□ 0.47
LEMD3-201ENST00000308330 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 PIK3R5Q8WYR1 880 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 CEP83Q9Y592 693 aa17.98■□□□□ 0.47
LEMD3-201ENST00000308330 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
LEMD3-201ENST00000308330 GBP2P32456 591 aaPredicted RBP17.97■□□□□ 0.47
LEMD3-201ENST00000308330 INCENPQ9NQS7 918 aa17.97■□□□□ 0.47
LEMD3-201ENST00000308330 ERLIN1O75477 346 aa17.97■□□□□ 0.47
LEMD3-201ENST00000308330 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
LEMD3-201ENST00000308330 KRBA2Q6ZNG9 492 aa17.96■□□□□ 0.47
LEMD3-201ENST00000308330 MCM10Q7L590 875 aa17.96■□□□□ 0.47
LEMD3-201ENST00000308330 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
LEMD3-201ENST00000308330 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
LEMD3-201ENST00000308330 STARD3NLO95772 234 aa17.96■□□□□ 0.47
LEMD3-201ENST00000308330 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
LEMD3-201ENST00000308330 NOL7Q9UMY1 257 aaKnown RBP17.96■□□□□ 0.47
LEMD3-201ENST00000308330 IRX5P78411 483 aaPredicted RBP17.96■□□□□ 0.47
LEMD3-201ENST00000308330 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
LEMD3-201ENST00000308330 CCDC172P0C7W6 258 aa17.95■□□□□ 0.46
LEMD3-201ENST00000308330 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
LEMD3-201ENST00000308330 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
LEMD3-201ENST00000308330 SHTN1A0MZ66 631 aa17.95■□□□□ 0.46
LEMD3-201ENST00000308330 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
LEMD3-201ENST00000308330 SCAF11Q99590 1463 aaKnown RBP17.94■□□□□ 0.46
LEMD3-201ENST00000308330 ZBTB22O15209 634 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 CT47B1P0C2W7 299 aaPredicted RBP17.94■□□□□ 0.46
LEMD3-201ENST00000308330 FBLN1P23142 703 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 CCDC27Q2M243 656 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
LEMD3-201ENST00000308330 ERC2O15083 957 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 ENOX2Q16206 610 aaKnown RBP17.93■□□□□ 0.46
LEMD3-201ENST00000308330 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
LEMD3-201ENST00000308330 BIRC2Q13490 618 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
LEMD3-201ENST00000308330 TMEM51Q9NW97 253 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 SYCE3A1L190 88 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 SYNE3Q6ZMZ3 975 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 PPM1EQ8WY54 764 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 MARCH6O60337 910 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 ZNF397Q8NF99 534 aaPredicted RBP17.92■□□□□ 0.46
LEMD3-201ENST00000308330 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
LEMD3-201ENST00000308330 ICE2Q659A1 982 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 RASSF8Q8NHQ8 419 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 C8orf37Q96NL8 207 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
LEMD3-201ENST00000308330 AKAP17AQ02040 695 aaKnown RBP17.91■□□□□ 0.46
LEMD3-201ENST00000308330 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 TRDNQ13061 729 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 PTPN14Q15678 1187 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
LEMD3-201ENST00000308330 C16orf45Q96MC5 204 aaPredicted RBP17.91■□□□□ 0.46
LEMD3-201ENST00000308330 CEP120Q8N960 986 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 FYB1O15117 783 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 BCAR3O75815 825 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 REC8O95072 547 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 MPHOSPH8Q99549 860 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 GOLGA6L7A0A1B0GV03 622 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
LEMD3-201ENST00000308330 SATB1Q01826 763 aa17.9■□□□□ 0.46
LEMD3-201ENST00000308330 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
LEMD3-201ENST00000308330 ATP10AO60312 1499 aa17.89■□□□□ 0.46
LEMD3-201ENST00000308330 GNAI2P04899 355 aa17.89■□□□□ 0.45
LEMD3-201ENST00000308330 C1orf115Q9H7X2 142 aa17.89■□□□□ 0.45
LEMD3-201ENST00000308330 CTTNBP2Q8WZ74 1663 aa17.89■□□□□ 0.45
LEMD3-201ENST00000308330 CASQ1P31415 396 aa17.89■□□□□ 0.45
LEMD3-201ENST00000308330 CTDP1Q9Y5B0 961 aaPredicted RBP17.89■□□□□ 0.45
LEMD3-201ENST00000308330 DHX16O60231 1041 aaKnown RBP17.89■□□□□ 0.45
LEMD3-201ENST00000308330 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms