RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PALLDQ8WX93 1383 aa10.36□□□□□ -0.75
TM4SF1-201ENST00000305366 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
TM4SF1-201ENST00000305366 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
TM4SF1-201ENST00000305366 POLKQ9UBT6 870 aa10.36□□□□□ -0.75
TM4SF1-201ENST00000305366 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
TM4SF1-201ENST00000305366 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
TM4SF1-201ENST00000305366 UTRNP46939 3433 aa10.35□□□□□ -0.75
TM4SF1-201ENST00000305366 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■□□□□ 9.7
TM4SF1-201ENST00000305366 AMIGO3Q86WK7 504 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 SMARCC1Q92922 1105 aaPredicted RBP10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 PANK3Q9H999 370 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 TMOD3Q9NYL9 352 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 ASAP1Q9ULH1 1129 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 BTAF1O14981 1849 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 HOXD11P31277 338 aaPredicted RBP10.34□□□□□ -0.75
TM4SF1-201ENST00000305366 USP54Q70EL1 1684 aa10.33□□□□□ -0.76
TM4SF1-201ENST00000305366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
TM4SF1-201ENST00000305366 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
TM4SF1-201ENST00000305366 EIF4A2Q14240 407 aaKnown RBP10.33□□□□□ -0.76
TM4SF1-201ENST00000305366 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 SIK1P57059 783 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 IFNL2Q8IZJ0 200 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 PAPPAQ13219 1627 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
TM4SF1-201ENST00000305366 GNPATO15228 680 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 PHKG2P15735 406 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 ITPK1Q13572 414 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 MORC1Q86VD1 984 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
TM4SF1-201ENST00000305366 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
TM4SF1-201ENST00000305366 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
TM4SF1-201ENST00000305366 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
TM4SF1-201ENST00000305366 ATG3Q9NT62 314 aa10.3□□□□□ -0.76
TM4SF1-201ENST00000305366 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
TM4SF1-201ENST00000305366 ZNF530Q6P9A1 599 aaPredicted RBP10.29□□□□□ -0.76
TM4SF1-201ENST00000305366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.76
TM4SF1-201ENST00000305366 CD2APQ9Y5K6 639 aa10.29□□□□□ -0.76
TM4SF1-201ENST00000305366 DOT1LQ8TEK3 1739 aa10.28□□□□□ -0.76
TM4SF1-201ENST00000305366 RGPD2P0DJD1 1756 aa10.28□□□□□ -0.76
TM4SF1-201ENST00000305366 CABP4P57796 275 aa10.28□□□□□ -0.76
TM4SF1-201ENST00000305366 PLEKHO1Q53GL0 409 aaPredicted RBP10.28□□□□□ -0.76
TM4SF1-201ENST00000305366 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
TM4SF1-201ENST00000305366 PTCD1O75127 700 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-201ENST00000305366 MTHFSP49914 203 aa10.27□□□□□ -0.77
TM4SF1-201ENST00000305366 TRAPPC3LQ5T215 181 aa10.27□□□□□ -0.77
TM4SF1-201ENST00000305366 MMP10P09238 476 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 SSFA2P28290 1259 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 SULT6B1Q6IMI4 303 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 KNSTRNQ9Y448 316 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 C1orf141Q5JVX7 400 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 RTCBQ9Y3I0 505 aaKnown RBP10.26□□□□□ -0.77
TM4SF1-201ENST00000305366 ERVV-2B6SEH9 535 aa10.25□□□□□ -0.77
TM4SF1-201ENST00000305366 NFATC2IPQ8NCF5 419 aa10.25□□□□□ -0.77
TM4SF1-201ENST00000305366 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
TM4SF1-201ENST00000305366 DCAF5Q96JK2 942 aa10.25□□□□□ -0.77
TM4SF1-201ENST00000305366 GOLGB1Q14789 3259 aaKnown RBP10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 A0A0G2JLW4 131 aa10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 RFC4P35249 363 aa10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 AMOTQ4VCS5 1084 aa10.24□□□□□ -0.77
TM4SF1-201ENST00000305366 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
TM4SF1-201ENST00000305366 HMOX1P09601 288 aa10.23□□□□□ -0.77
TM4SF1-201ENST00000305366 BCS1LQ9Y276 419 aa10.23□□□□□ -0.77
TM4SF1-201ENST00000305366 NPC1L1Q9UHC9 1359 aa10.22□□□□□ -0.77
TM4SF1-201ENST00000305366 CC2D1BQ5T0F9 858 aaKnown RBP10.22□□□□□ -0.77
TM4SF1-201ENST00000305366 NLGN1Q8N2Q7 840 aa10.22□□□□□ -0.77
TM4SF1-201ENST00000305366 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
TM4SF1-201ENST00000305366 ATP10DQ9P241 1426 aa10.22□□□□□ -0.77
TM4SF1-201ENST00000305366 IL13P35225 146 aa10.21□□□□□ -0.77
TM4SF1-201ENST00000305366 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.77
TM4SF1-201ENST00000305366 SRP68Q9UHB9 627 aaKnown RBP10.21□□□□□ -0.77
TM4SF1-201ENST00000305366 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
TM4SF1-201ENST00000305366 LY75O60449 1722 aa10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 RPS6KA4O75676 772 aa10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 GYS1P13807 737 aa10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 DPEP1P16444 411 aa10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 RRP1P56182 461 aaKnown RBP10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 LGR6Q9HBX8 967 aa10.21□□□□□ -0.78
TM4SF1-201ENST00000305366 KIF20BQ96Q89 1820 aa10.2□□□□□ -0.78
TM4SF1-201ENST00000305366 SLC39A6Q13433 755 aa10.2□□□□□ -0.78
TM4SF1-201ENST00000305366 RC3H1Q5TC82 1133 aaKnown RBP10.2□□□□□ -0.78
TM4SF1-201ENST00000305366 CCDC136Q96JN2 1154 aa10.2□□□□□ -0.78
TM4SF1-201ENST00000305366 C4BP0C0L5 1744 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms