RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 KIF20BQ96Q89 1820 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 CYP27B1O15528 508 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 HTRA3P83110 453 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 HSP90AB2PQ58FF8 381 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 SPG7Q9UQ90 795 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 KDM2BQ8NHM5 1336 aa14.14□□□□□ -0.15
COL4A3-201ENST00000304990 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
COL4A3-201ENST00000304990 KIAA1551Q9HCM1 1747 aa14.13□□□□□ -0.15
COL4A3-201ENST00000304990 INSRP06213 1382 aa14.13□□□□□ -0.15
COL4A3-201ENST00000304990 CCDC87Q9NVE4 849 aa14.13□□□□□ -0.15
COL4A3-201ENST00000304990 FLT4P35916 1363 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 PLEKHG2Q9H7P9 1386 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 FSTL1Q12841 308 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 C9orf131Q5VYM1 1079 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
COL4A3-201ENST00000304990 DPEP1P16444 411 aa14.11□□□□□ -0.15
COL4A3-201ENST00000304990 TMF1P82094 1093 aa14.11□□□□□ -0.15
COL4A3-201ENST00000304990 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
COL4A3-201ENST00000304990 PARP3Q9Y6F1 533 aa14.11□□□□□ -0.15
COL4A3-201ENST00000304990 ARFGEF1Q9Y6D6 1849 aa14.11□□□□□ -0.15
COL4A3-201ENST00000304990 BRCA1P38398 1863 aaKnown RBP14.1□□□□□ -0.15
COL4A3-201ENST00000304990 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 FYB1O15117 783 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
COL4A3-201ENST00000304990 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 ITPK1Q13572 414 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 JMYQ8N9B5 988 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 ASAP1Q9ULH1 1129 aa14.1□□□□□ -0.15
COL4A3-201ENST00000304990 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 RFC4P35249 363 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 PRELPP51888 382 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 TNRC6CQ9HCJ0 1690 aaKnown RBP14.09□□□□□ -0.15
COL4A3-201ENST00000304990 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
COL4A3-201ENST00000304990 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
COL4A3-201ENST00000304990 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
COL4A3-201ENST00000304990 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
COL4A3-201ENST00000304990 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
COL4A3-201ENST00000304990 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
COL4A3-201ENST00000304990 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
COL4A3-201ENST00000304990 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
COL4A3-201ENST00000304990 DALRD3Q5D0E6 543 aaKnown RBP14.06□□□□□ -0.16
COL4A3-201ENST00000304990 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
COL4A3-201ENST00000304990 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
COL4A3-201ENST00000304990 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
COL4A3-201ENST00000304990 TESK2Q96S53 571 aa14.05□□□□□ -0.16
COL4A3-201ENST00000304990 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-201ENST00000304990 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
COL4A3-201ENST00000304990 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
COL4A3-201ENST00000304990 GYS1P13807 737 aa14.03□□□□□ -0.16
COL4A3-201ENST00000304990 PHKG2P15735 406 aa14.03□□□□□ -0.16
COL4A3-201ENST00000304990 SBF1O95248 1867 aa14.03□□□□□ -0.16
COL4A3-201ENST00000304990 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.16
COL4A3-201ENST00000304990 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
COL4A3-201ENST00000304990 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
COL4A3-201ENST00000304990 DCAF5Q96JK2 942 aa14.02□□□□□ -0.17
COL4A3-201ENST00000304990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL4A3-201ENST00000304990 RPS6KA4O75676 772 aa14.01□□□□□ -0.17
COL4A3-201ENST00000304990 KCNA3P22001 575 aa14.01□□□□□ -0.17
COL4A3-201ENST00000304990 RC3H1Q5TC82 1133 aaKnown RBP14.01□□□□□ -0.17
COL4A3-201ENST00000304990 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
COL4A3-201ENST00000304990 EYA1Q99502 592 aa14.01□□□□□ -0.17
COL4A3-201ENST00000304990 KDRP35968 1356 aa14□□□□□ -0.17
COL4A3-201ENST00000304990 CNTNAP4Q9C0A0 1308 aa14□□□□□ -0.17
COL4A3-201ENST00000304990 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
COL4A3-201ENST00000304990 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
COL4A3-201ENST00000304990 CHRNA5P30532 468 aa13.99□□□□□ -0.17
COL4A3-201ENST00000304990 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
COL4A3-201ENST00000304990 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
COL4A3-201ENST00000304990 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
COL4A3-201ENST00000304990 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
COL4A3-201ENST00000304990 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-201ENST00000304990 CABP4P57796 275 aa13.98□□□□□ -0.17
COL4A3-201ENST00000304990 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
COL4A3-201ENST00000304990 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
COL4A3-201ENST00000304990 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
COL4A3-201ENST00000304990 SRP68Q9UHB9 627 aaKnown RBP13.97□□□□□ -0.17
COL4A3-201ENST00000304990 TIAM2Q8IVF5 1701 aa13.97□□□□□ -0.17
COL4A3-201ENST00000304990 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.17
COL4A3-201ENST00000304990 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
COL4A3-201ENST00000304990 RASSF7Q02833 373 aa13.96□□□□□ -0.17
COL4A3-201ENST00000304990 FKBP8Q14318 412 aa13.96□□□□□ -0.17
COL4A3-201ENST00000304990 LMNB1P20700 586 aa13.95□□□□□ -0.18
COL4A3-201ENST00000304990 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
COL4A3-201ENST00000304990 DDR1Q08345 913 aa13.95□□□□□ -0.18
COL4A3-201ENST00000304990 USP42Q9H9J4 1324 aaKnown RBP13.94□□□□□ -0.18
COL4A3-201ENST00000304990 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
COL4A3-201ENST00000304990 ZPR1O75312 459 aa13.94□□□□□ -0.18
COL4A3-201ENST00000304990 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
COL4A3-201ENST00000304990 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
COL4A3-201ENST00000304990 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-201ENST00000304990 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-201ENST00000304990 MTHFSP49914 203 aa13.92□□□□□ -0.18
COL4A3-201ENST00000304990 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
COL4A3-201ENST00000304990 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
COL4A3-201ENST00000304990 CARD14Q9BXL6 1004 aa13.92□□□□□ -0.18
COL4A3-201ENST00000304990 TJP1Q07157 1748 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms