RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 NFKBIBQ15653 356 aa27.9■■■□□ 2.06
NHLH1-201ENST00000302101 TOM1L2Q6ZVM7 507 aa27.89■■■□□ 2.06
NHLH1-201ENST00000302101 SPG7Q9UQ90 795 aa27.89■■■□□ 2.06
NHLH1-201ENST00000302101 COL5A2P05997 1499 aaPredicted RBP27.89■■■□□ 2.06
NHLH1-201ENST00000302101 API5Q9BZZ5 524 aaKnown RBP27.88■■■□□ 2.05
NHLH1-201ENST00000302101 AHDC1Q5TGY3 1603 aaPredicted RBP27.88■■■□□ 2.05
NHLH1-201ENST00000302101 SLC4A2P04920 1241 aa27.88■■■□□ 2.05
NHLH1-201ENST00000302101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.87■■■□□ 2.05
NHLH1-201ENST00000302101 BTBD11A6QL63 1104 aa27.86■■■□□ 2.05
NHLH1-201ENST00000302101 KDM3BQ7LBC6 1761 aa27.86■■■□□ 2.05
NHLH1-201ENST00000302101 ABCC4O15439 1325 aa27.86■■■□□ 2.05
NHLH1-201ENST00000302101 OVOS2A0A0G2JMS6 1433 aa27.85■■■□□ 2.05
NHLH1-201ENST00000302101 STRN4Q9NRL3 753 aa27.85■■■□□ 2.05
NHLH1-201ENST00000302101 PHKG2P15735 406 aa27.84■■■□□ 2.05
NHLH1-201ENST00000302101 EVA1CP58658 441 aa27.84■■■□□ 2.05
NHLH1-201ENST00000302101 NECTIN2Q92692 538 aa27.83■■■□□ 2.05
NHLH1-201ENST00000302101 ZBTB40Q9NUA8 1239 aa27.83■■■□□ 2.05
NHLH1-201ENST00000302101 KCNQ3O43525 872 aa27.83■■■□□ 2.05
NHLH1-201ENST00000302101 EIF4A1P60842 406 aaKnown RBP27.82■■■□□ 2.04
NHLH1-201ENST00000302101 CCDC30Q5VVM6 783 aa27.82■■■□□ 2.04
NHLH1-201ENST00000302101 IFNL2Q8IZJ0 200 aa27.82■■■□□ 2.04
NHLH1-201ENST00000302101 STK31Q9BXU1 1019 aa27.82■■■□□ 2.04
NHLH1-201ENST00000302101 SOS1Q07889 1333 aaPredicted RBP27.82■■■□□ 2.04
NHLH1-201ENST00000302101 ADAMTS7Q9UKP4 1686 aa27.82■■■□□ 2.04
NHLH1-201ENST00000302101 PKD1L3Q7Z443 1732 aa27.81■■■□□ 2.04
NHLH1-201ENST00000302101 PTPRCP08575 1304 aa27.81■■■□□ 2.04
NHLH1-201ENST00000302101 PLEKHG2Q9H7P9 1386 aa27.81■■■□□ 2.04
NHLH1-201ENST00000302101 LARP1Q6PKG0 1096 aaKnown RBP27.81■■■□□ 2.04
NHLH1-201ENST00000302101 SCN11AQ9UI33 1791 aa27.81■■■□□ 2.04
NHLH1-201ENST00000302101 SIPA1L3O60292 1781 aaPredicted RBP27.8■■■□□ 2.04
NHLH1-201ENST00000302101 ZBTB7BO15156 539 aaPredicted RBP27.79■■■□□ 2.04
NHLH1-201ENST00000302101 CYP27B1O15528 508 aa27.79■■■□□ 2.04
NHLH1-201ENST00000302101 G2E3Q7L622 706 aa27.79■■■□□ 2.04
NHLH1-201ENST00000302101 RWDD1Q9H446 243 aaPredicted RBP27.79■■■□□ 2.04
NHLH1-201ENST00000302101 CARD10Q9BWT7 1032 aa27.79■■■□□ 2.04
NHLH1-201ENST00000302101 RGS12O14924 1447 aa27.79■■■□□ 2.04
NHLH1-201ENST00000302101 KDM6AO15550 1401 aaPredicted RBP27.78■■■□□ 2.04
NHLH1-201ENST00000302101 PHLPP1O60346 1717 aa27.78■■■□□ 2.04
NHLH1-201ENST00000302101 CACNA1FO60840 1977 aa27.78■■■□□ 2.04
NHLH1-201ENST00000302101 PIP4K2BP78356 416 aa27.78■■■□□ 2.04
NHLH1-201ENST00000302101 PARP4Q9UKK3 1724 aaKnown RBP27.78■■■□□ 2.04
NHLH1-201ENST00000302101 TOM1O60784 492 aa27.77■■■□□ 2.04
NHLH1-201ENST00000302101 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
NHLH1-201ENST00000302101 COL22A1Q8NFW1 1626 aaPredicted RBP27.77■■■□□ 2.04
NHLH1-201ENST00000302101 HDGFL1Q5TGJ6 251 aa27.77■■■□□ 2.04
NHLH1-201ENST00000302101 IL27Q8NEV9 243 aa27.76■■■□□ 2.03
NHLH1-201ENST00000302101 CHMP4BQ9H444 224 aaKnown RBP27.76■■■□□ 2.03
NHLH1-201ENST00000302101 GSE1Q14687 1217 aa27.75■■■□□ 2.03
NHLH1-201ENST00000302101 SEC24BO95487 1268 aa27.74■■■□□ 2.03
NHLH1-201ENST00000302101 EIF2S2P20042 333 aaKnown RBP27.74■■■□□ 2.03
NHLH1-201ENST00000302101 DCAF5Q96JK2 942 aa27.74■■■□□ 2.03
NHLH1-201ENST00000302101 SLC52A2Q9HAB3 445 aa27.74■■■□□ 2.03
NHLH1-201ENST00000302101 IL2RBP14784 551 aa27.74■■■□□ 2.03
NHLH1-201ENST00000302101 INTS3Q68E01 1043 aaKnown RBP27.74■■■□□ 2.03
NHLH1-201ENST00000302101 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
NHLH1-201ENST00000302101 ZCRB1Q8TBF4 217 aaKnown RBP27.73■■■□□ 2.03
NHLH1-201ENST00000302101 COL16A1Q07092 1604 aaPredicted RBP27.73■■■□□ 2.03
NHLH1-201ENST00000302101 HOXB7P09629 217 aa27.72■■■□□ 2.03
NHLH1-201ENST00000302101 COL14A1Q05707 1796 aaKnown RBP27.72■■■□□ 2.03
NHLH1-201ENST00000302101 FLIIQ13045 1269 aa27.72■■■□□ 2.03
NHLH1-201ENST00000302101 HSP90AB1P08238 724 aaKnown RBP27.71■■■□□ 2.03
NHLH1-201ENST00000302101 HDAC1Q13547 482 aaPredicted RBP27.71■■■□□ 2.03
NHLH1-201ENST00000302101 F6X3S4 739 aa27.7■■■□□ 2.03
NHLH1-201ENST00000302101 C1orf115Q9H7X2 142 aa27.7■■■□□ 2.02
NHLH1-201ENST00000302101 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.02
NHLH1-201ENST00000302101 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.02
NHLH1-201ENST00000302101 FRAT2O75474 233 aaPredicted RBP27.69■■■□□ 2.02
NHLH1-201ENST00000302101 FKBP5Q13451 457 aaPredicted RBP27.69■■■□□ 2.02
NHLH1-201ENST00000302101 SLC39A6Q13433 755 aa27.69■■■□□ 2.02
NHLH1-201ENST00000302101 SLC4A10Q6U841 1118 aa27.68■■■□□ 2.02
NHLH1-201ENST00000302101 GIGYF1O75420 1035 aaPredicted RBP27.68■■■□□ 2.02
NHLH1-201ENST00000302101 ZNF790Q6PG37 636 aa27.68■■■□□ 2.02
NHLH1-201ENST00000302101 CHMP4AQ9BY43 222 aa27.67■■■□□ 2.02
NHLH1-201ENST00000302101 HEG1Q9ULI3 1381 aa27.67■■■□□ 2.02
NHLH1-201ENST00000302101 UBAP1LF5GYI3 381 aa27.66■■■□□ 2.02
NHLH1-201ENST00000302101 PHAXQ9H814 394 aaKnown RBP27.66■■■□□ 2.02
NHLH1-201ENST00000302101 CHPF2Q9P2E5 772 aa27.66■■■□□ 2.02
NHLH1-201ENST00000302101 PDZRN3Q9UPQ7 1066 aa27.66■■■□□ 2.02
NHLH1-201ENST00000302101 ADAMTS2O95450 1211 aa27.65■■■□□ 2.02
NHLH1-201ENST00000302101 DDX54Q8TDD1 881 aaKnown RBP27.65■■■□□ 2.02
NHLH1-201ENST00000302101 MRC1P22897 1456 aa27.65■■■□□ 2.02
NHLH1-201ENST00000302101 PRAMEF22A3QJZ6 481 aa27.64■■■□□ 2.02
NHLH1-201ENST00000302101 CABP4P57796 275 aa27.64■■■□□ 2.02
NHLH1-201ENST00000302101 RTN4Q9NQC3 1192 aaKnown RBP27.64■■■□□ 2.02
NHLH1-201ENST00000302101 SHANK3Q9BYB0 1731 aa27.63■■■□□ 2.01
NHLH1-201ENST00000302101 CCT4P50991 539 aaKnown RBP27.62■■■□□ 2.01
NHLH1-201ENST00000302101 NUTM2BA6NNL0 878 aaPredicted RBP27.6■■■□□ 2.01
NHLH1-201ENST00000302101 NUTM2EB1AL46 878 aaPredicted RBP27.6■■■□□ 2.01
NHLH1-201ENST00000302101 ANXA1P04083 346 aa27.6■■■□□ 2.01
NHLH1-201ENST00000302101 BECN1Q14457 450 aa27.6■■■□□ 2.01
NHLH1-201ENST00000302101 NUTM2AQ8IVF1 878 aaPredicted RBP27.6■■■□□ 2.01
NHLH1-201ENST00000302101 DBF4Q9UBU7 674 aaPredicted RBP27.6■■■□□ 2.01
NHLH1-201ENST00000302101 TTC5Q8N0Z6 440 aa27.59■■■□□ 2.01
NHLH1-201ENST00000302101 MEIS3Q99687 375 aa27.59■■■□□ 2.01
NHLH1-201ENST00000302101 SMC5Q8IY18 1101 aa27.59■■■□□ 2.01
NHLH1-201ENST00000302101 UPF2Q9HAU5 1272 aaKnown RBP27.59■■■□□ 2.01
NHLH1-201ENST00000302101 NKX1-1Q15270 411 aaPredicted RBP27.58■■■□□ 2.01
NHLH1-201ENST00000302101 ZNF496Q96IT1 587 aaPredicted RBP27.58■■■□□ 2.01
NHLH1-201ENST00000302101 PLCH1Q4KWH8 1693 aa27.58■■■□□ 2.01
NHLH1-201ENST00000302101 SIRT2Q8IXJ6 389 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms