RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 SYNE3Q6ZMZ3 975 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 RPAP2Q8IXW5 612 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-201ENST00000301981 KINO60870 393 aaKnown RBP9.16□□□□□ -0.94
LRRC28-201ENST00000301981 HSP90AB3PQ58FF7 597 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 PPP1R42Q7Z4L9 355 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 MAGI2Q86UL8 1455 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
LRRC28-201ENST00000301981 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
LRRC28-201ENST00000301981 POLR3GO15318 223 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 RAB11FIP3O75154 756 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 FLIIQ13045 1269 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 CCDC112Q8NEF3 446 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ERCC4Q92889 916 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 PDE1AP54750 535 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 HAND2P61296 217 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 KRT85P78386 507 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 SNRKQ9NRH2 765 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 CTTNBP2Q8WZ74 1663 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 IFT140Q96RY7 1462 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC28-201ENST00000301981 STK38Q15208 465 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 SLC4A8Q2Y0W8 1093 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 ZSWIM4Q9H7M6 989 aa9.15□□□□□ -0.94
LRRC28-201ENST00000301981 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.95
LRRC28-201ENST00000301981 SAMD1Q6SPF0 538 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 PHAXQ9H814 394 aaKnown RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 PI4KAP2A4QPH2 592 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 PI4KAP1Q8N8J0 262 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 NOC3LQ8WTT2 800 aaKnown RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 STX6O43752 255 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 CT47B1P0C2W7 299 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 PDIA4P13667 645 aaKnown RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 ERBB4Q15303 1308 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 SERPINC1P01008 464 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 PDCL3Q9H2J4 239 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 IBSPP21815 317 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-201ENST00000301981 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
LRRC28-201ENST00000301981 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 CCDC183Q5T5S1 534 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 CEP85Q6P2H3 762 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 SMC5Q8IY18 1101 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 BCORL1Q5H9F3 1711 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 USP19O94966 1318 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 DDX58O95786 925 aaKnown RBP9.13□□□□□ -0.95
LRRC28-201ENST00000301981 RALYLQ86SE5 291 aaKnown RBP9.13□□□□□ -0.95
LRRC28-201ENST00000301981 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 NSFL1CQ9UNZ2 370 aaKnown RBP9.13□□□□□ -0.95
LRRC28-201ENST00000301981 COL17A1Q9UMD9 1497 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-201ENST00000301981 TNNT1P13805 278 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 PSMA5P28066 241 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 TRIM29Q14134 588 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 LUZP1Q86V48 1076 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 GNAT3A8MTJ3 354 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-201ENST00000301981 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
LRRC28-201ENST00000301981 PTGS1P23219 599 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 MYD88Q99836 296 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 A0A087WWV3 80 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 FAM193AP78312 1265 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRRC28-201ENST00000301981 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 RAPGEF4Q8WZA2 1011 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 MSH6P52701 1360 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 TPM3P06753 285 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 MCM2P49736 904 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 SLC39A6Q13433 755 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 CPLX3Q8WVH0 158 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 CHPF2Q9P2E5 772 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 PALD1Q9ULE6 856 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 WDR62O43379 1518 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 DNAJC25Q9H1X3 360 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 DENND4BO75064 1496 aaPredicted RBP9.12□□□□□ -0.95
LRRC28-201ENST00000301981 EVA1CP58658 441 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
LRRC28-201ENST00000301981 AK2P54819 239 aa9.11□□□□□ -0.95
LRRC28-201ENST00000301981 TRDNQ13061 729 aa9.11□□□□□ -0.95
LRRC28-201ENST00000301981 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
LRRC28-201ENST00000301981 ANO6Q4KMQ2 910 aa9.11□□□□□ -0.95
LRRC28-201ENST00000301981 MAP3K2Q9Y2U5 619 aa9.11□□□□□ -0.95
LRRC28-201ENST00000301981 BLMP54132 1417 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-201ENST00000301981 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
LRRC28-201ENST00000301981 DDX46Q7L014 1031 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms