RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 MCM4P33991 863 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 PSEN1P49768 467 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 PMFBP1Q8TBY8 1022 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 SCYL1Q96KG9 808 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
MMP3-201ENST00000299855 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
MMP3-201ENST00000299855 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 IGHDP01880 384 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 SCP2P22307 547 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 BCL2L13Q9BXK5 485 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
MMP3-201ENST00000299855 SEMA3FQ13275 785 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
MMP3-201ENST00000299855 FBXO41Q8TF61 875 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 SPACA7Q96KW9 195 aa11.18□□□□□ -0.62
MMP3-201ENST00000299855 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
MMP3-201ENST00000299855 E2F4Q16254 413 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 ERBB3P21860 1342 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 CENPJQ9HC77 1338 aaPredicted RBP11.17□□□□□ -0.62
MMP3-201ENST00000299855 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
MMP3-201ENST00000299855 NPATQ14207 1427 aa11.17□□□□□ -0.62
MMP3-201ENST00000299855 DNAJC14Q6Y2X3 702 aaPredicted RBP11.16□□□□□ -0.62
MMP3-201ENST00000299855 SNRNP27Q8WVK2 155 aaKnown RBP11.16□□□□□ -0.62
MMP3-201ENST00000299855 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
MMP3-201ENST00000299855 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 CFAP69A5D8W1 941 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 SEC24BO95487 1268 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 GGT6Q6P531 493 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
MMP3-201ENST00000299855 COG6Q9Y2V7 657 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
MMP3-201ENST00000299855 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.62
MMP3-201ENST00000299855 TPM2P07951 284 aa11.15□□□□□ -0.62
MMP3-201ENST00000299855 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
MMP3-201ENST00000299855 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
MMP3-201ENST00000299855 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 BIRC2Q13490 618 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 SDE2Q6IQ49 451 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 GIPC2Q8TF65 315 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 CALR3Q96L12 384 aaKnown RBP11.14□□□□□ -0.63
MMP3-201ENST00000299855 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 NRBP1Q9UHY1 535 aa11.14□□□□□ -0.63
MMP3-201ENST00000299855 ESPNB1AK53 854 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 SYNMO15061 1565 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
MMP3-201ENST00000299855 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 BCAR3O75815 825 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 ICE2Q659A1 982 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 PDCL3Q9H2J4 239 aa11.13□□□□□ -0.63
MMP3-201ENST00000299855 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
MMP3-201ENST00000299855 RNF17Q9BXT8 1623 aaKnown RBP11.12□□□□□ -0.63
MMP3-201ENST00000299855 CCDC189A1A4V9 331 aa11.12□□□□□ -0.63
MMP3-201ENST00000299855 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
MMP3-201ENST00000299855 ATL2Q8NHH9 583 aa11.12□□□□□ -0.63
MMP3-201ENST00000299855 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
MMP3-201ENST00000299855 PTPRTO14522 1441 aa11.12□□□□□ -0.63
MMP3-201ENST00000299855 HOXA2O43364 376 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 TERF1P54274 439 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 KIF3BO15066 747 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 SKOR2Q2VWA4 1001 aaPredicted RBP11.11□□□□□ -0.63
MMP3-201ENST00000299855 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 ZNF830Q96NB3 372 aaPredicted RBP11.11□□□□□ -0.63
MMP3-201ENST00000299855 RPS6KC1Q96S38 1066 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 IRF2BPLQ9H1B7 796 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
MMP3-201ENST00000299855 ZCRB1Q8TBF4 217 aaKnown RBP11.1□□□□□ -0.63
MMP3-201ENST00000299855 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
MMP3-201ENST00000299855 UNC13BO14795 1591 aa11.1□□□□□ -0.63
MMP3-201ENST00000299855 VAMP1P23763 118 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
MMP3-201ENST00000299855 MTA1Q13330 715 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 PANK2Q9BZ23 570 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.09□□□□□ -0.63
MMP3-201ENST00000299855 APAF1O14727 1248 aa11.09□□□□□ -0.63
MMP3-201ENST00000299855 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
MMP3-201ENST00000299855 PCGF5Q86SE9 256 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 PRDM4Q9UKN5 801 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
MMP3-201ENST00000299855 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 TBX4P57082 545 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 NBPF5PQ86XG9 351 aaPredicted RBP11.08□□□□□ -0.64
MMP3-201ENST00000299855 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
MMP3-201ENST00000299855 BRINP2Q9C0B6 783 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms