RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
TSC1-201ENST00000298552 PYM1Q9BRP8 204 aaKnown RBP8.68□□□□□ -1.02
TSC1-201ENST00000298552 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
TSC1-201ENST00000298552 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
TSC1-201ENST00000298552 UTP14AQ9BVJ6 771 aaKnown RBP8.68□□□□□ -1.02
TSC1-201ENST00000298552 TICAM2Q86XR7 235 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CCDC155Q8N6L0 562 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 SERPINC1P01008 464 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CUL4BQ13620 913 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CAMK4Q16566 473 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 FKBP15Q5T1M5 1219 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 BCAP29Q9UHQ4 241 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CCDC160A6NGH7 325 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 LMAN1P49257 510 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 SCLT1Q96NL6 688 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
TSC1-201ENST00000298552 PRKRIP1Q9H875 184 aaPredicted RBP8.67□□□□□ -1.02
TSC1-201ENST00000298552 TMOD2Q9NZR1 351 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CEP164Q9UPV0 1460 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 ZSCAN12O43309 604 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 UQCRHP07919 91 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
TSC1-201ENST00000298552 RRBP1Q9P2E9 1410 aaKnown RBP8.67□□□□□ -1.02
TSC1-201ENST00000298552 NUF2Q9BZD4 464 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 PAFAH1B1P43034 410 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 FAM8A1Q9UBU6 413 aa8.67□□□□□ -1.02
TSC1-201ENST00000298552 LUC7L2Q9Y383 392 aaKnown RBP8.67□□□□□ -1.02
TSC1-201ENST00000298552 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
TSC1-201ENST00000298552 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 NGDNQ8NEJ9 315 aaKnown RBP8.66□□□□□ -1.02
TSC1-201ENST00000298552 ATRIPQ8WXE1 791 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 ANKRD12Q6UB98 2062 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 WDR78Q5VTH9 848 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 IFT74Q96LB3 600 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 CCDC77Q9BR77 488 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 ARL1P40616 181 aaPredicted RBP8.66□□□□□ -1.02
TSC1-201ENST00000298552 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 MUM1L1Q5H9M0 696 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 RFX1P22670 979 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 RASAL2Q9UJF2 1139 aa8.66□□□□□ -1.02
TSC1-201ENST00000298552 C16orf72Q14CZ0 275 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 CTR9Q6PD62 1173 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 COG6Q9Y2V7 657 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 ZNF76P36508 570 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
TSC1-201ENST00000298552 CCT6BQ92526 530 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 EPSTI1Q96J88 318 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 PHF23Q9BUL5 403 aaPredicted RBP8.65□□□□□ -1.02
TSC1-201ENST00000298552 VPS37CA5D8V6 355 aaPredicted RBP8.65□□□□□ -1.02
TSC1-201ENST00000298552 ERCC5P28715 1186 aaPredicted RBP8.65□□□□□ -1.02
TSC1-201ENST00000298552 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.02
TSC1-201ENST00000298552 CCDC113Q9H0I3 377 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 USP25Q9UHP3 1055 aa8.65□□□□□ -1.02
TSC1-201ENST00000298552 B4DLN1 442 aa8.65□□□□□ -1.03
TSC1-201ENST00000298552 MRPL12P52815 198 aaKnown RBP8.65□□□□□ -1.03
TSC1-201ENST00000298552 TRAF1Q13077 416 aa8.65□□□□□ -1.03
TSC1-201ENST00000298552 SETDB1Q15047 1291 aa8.65□□□□□ -1.03
TSC1-201ENST00000298552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.037e-10■■□□□ 14.3
TSC1-201ENST00000298552 SOX12O15370 315 aa8.65□□□□□ -1.03
TSC1-201ENST00000298552 MTUS1Q9ULD2 1270 aa8.65□□□□□ -1.03
TSC1-201ENST00000298552 IRX4P78413 519 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 BIRC2Q13490 618 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 RNF187Q5TA31 235 aaPredicted RBP8.64□□□□□ -1.03
TSC1-201ENST00000298552 TBC1D31Q96DN5 1066 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 GIPC1O14908 333 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 MRE11P49959 708 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 SPECC1Q5M775 1068 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 CACTINQ8WUQ7 758 aaKnown RBP8.64□□□□□ -1.03
TSC1-201ENST00000298552 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 CTAGE6Q86UF2 777 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 TXNDC16Q9P2K2 825 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 IVLP07476 585 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 MAP3K11Q16584 847 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 MXRA7P84157 204 aa8.64□□□□□ -1.03
TSC1-201ENST00000298552 A0A1W2PRG0 241 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 NCBP1Q09161 790 aaKnown RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 TRIM60Q495X7 471 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 PPP4R3BQ5MIZ7 849 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 TRHP20396 242 aaPredicted RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 EP400NLQ6ZTU2 488 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 DDX19BQ9UMR2 479 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 KIF5BP33176 963 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 DAAM1Q9Y4D1 1078 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 RFC1P35251 1148 aaPredicted RBP8.63□□□□□ -1.03
TSC1-201ENST00000298552 INPP1P49441 399 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
TSC1-201ENST00000298552 NINQ8N4C6 2090 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms