RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 PANK1Q8TE04 598 aa23.71■■□□□ 1.39
SEC61A2-201ENST00000298428 TCERG1O14776 1098 aaKnown RBP23.7■■□□□ 1.39
SEC61A2-201ENST00000298428 SLC52A2Q9HAB3 445 aa23.7■■□□□ 1.39
SEC61A2-201ENST00000298428 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
SEC61A2-201ENST00000298428 B4GALNT3Q6L9W6 998 aa23.7■■□□□ 1.38
SEC61A2-201ENST00000298428 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
SEC61A2-201ENST00000298428 MRC1P22897 1456 aa23.69■■□□□ 1.38
SEC61A2-201ENST00000298428 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
SEC61A2-201ENST00000298428 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
SEC61A2-201ENST00000298428 C8orf37Q96NL8 207 aa23.69■■□□□ 1.38
SEC61A2-201ENST00000298428 MS4A1P11836 297 aa23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 TRIM27P14373 513 aa23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 CLUAP1Q96AJ1 413 aa23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 SPATA31A1Q5TZJ5 1347 aa23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 LRP6O75581 1613 aa23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 FTSJ3Q8IY81 847 aaKnown RBP23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
SEC61A2-201ENST00000298428 WNK3Q9BYP7 1800 aa23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 KCNQ3O43525 872 aa23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 RLBP1P12271 317 aa23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 DZIP1LQ8IYY4 767 aaKnown RBP23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 NGLY1Q96IV0 654 aa23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 CCDC136Q96JN2 1154 aa23.67■■□□□ 1.38
SEC61A2-201ENST00000298428 COG6Q9Y2V7 657 aa23.66■■□□□ 1.38
SEC61A2-201ENST00000298428 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
SEC61A2-201ENST00000298428 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
SEC61A2-201ENST00000298428 NFATC2IPQ8NCF5 419 aa23.66■■□□□ 1.38
SEC61A2-201ENST00000298428 UNC5CLQ8IV45 518 aa23.65■■□□□ 1.38
SEC61A2-201ENST00000298428 SPATA31A5Q5VU36 1347 aa23.65■■□□□ 1.38
SEC61A2-201ENST00000298428 SPATA31A7Q8IWB4 1347 aa23.65■■□□□ 1.38
SEC61A2-201ENST00000298428 ARHGAP45Q92619 1136 aa23.64■■□□□ 1.38
SEC61A2-201ENST00000298428 CABP4P57796 275 aa23.64■■□□□ 1.37
SEC61A2-201ENST00000298428 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
SEC61A2-201ENST00000298428 CCDC9Q9Y3X0 531 aaKnown RBP23.64■■□□□ 1.37
SEC61A2-201ENST00000298428 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
SEC61A2-201ENST00000298428 HOXB7P09629 217 aa23.62■■□□□ 1.37
SEC61A2-201ENST00000298428 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
SEC61A2-201ENST00000298428 ZNF790Q6PG37 636 aa23.62■■□□□ 1.37
SEC61A2-201ENST00000298428 STK31Q9BXU1 1019 aa23.62■■□□□ 1.37
SEC61A2-201ENST00000298428 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
SEC61A2-201ENST00000298428 EXOC5O00471 708 aa23.61■■□□□ 1.37
SEC61A2-201ENST00000298428 SLC4A2P04920 1241 aa23.61■■□□□ 1.37
SEC61A2-201ENST00000298428 FNBP4Q8N3X1 1017 aaPredicted RBP23.61■■□□□ 1.37
SEC61A2-201ENST00000298428 TNS2Q63HR2 1409 aa23.61■■□□□ 1.37
SEC61A2-201ENST00000298428 MVPQ14764 893 aaKnown RBP23.6■■□□□ 1.37
SEC61A2-201ENST00000298428 SLC39A6Q13433 755 aa23.6■■□□□ 1.37
SEC61A2-201ENST00000298428 HDGFL1Q5TGJ6 251 aa23.6■■□□□ 1.37
SEC61A2-201ENST00000298428 HEG1Q9ULI3 1381 aa23.6■■□□□ 1.37
SEC61A2-201ENST00000298428 MEX3CQ5U5Q3 659 aaKnown RBP23.59■■□□□ 1.37
SEC61A2-201ENST00000298428 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
SEC61A2-201ENST00000298428 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
SEC61A2-201ENST00000298428 VPS72Q15906 364 aa23.58■■□□□ 1.37
SEC61A2-201ENST00000298428 BARGINQ6ZT62 677 aa23.58■■□□□ 1.37
SEC61A2-201ENST00000298428 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
SEC61A2-201ENST00000298428 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.36
SEC61A2-201ENST00000298428 TMEM57Q8N5G2 664 aa23.58■■□□□ 1.36
SEC61A2-201ENST00000298428 PTPRCP08575 1304 aa23.57■■□□□ 1.36
SEC61A2-201ENST00000298428 GIGYF1O75420 1035 aaPredicted RBP23.57■■□□□ 1.36
SEC61A2-201ENST00000298428 ITPRIPQ8IWB1 547 aa23.57■■□□□ 1.36
SEC61A2-201ENST00000298428 TOGARAM1Q9Y4F4 1720 aa23.57■■□□□ 1.36
SEC61A2-201ENST00000298428 USP21Q9UK80 565 aa23.56■■□□□ 1.36
SEC61A2-201ENST00000298428 ABCC4O15439 1325 aa23.56■■□□□ 1.36
SEC61A2-201ENST00000298428 EIF2S2P20042 333 aaKnown RBP23.56■■□□□ 1.36
SEC61A2-201ENST00000298428 DDB1Q16531 1140 aa23.56■■□□□ 1.36
SEC61A2-201ENST00000298428 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.55■■□□□ 1.36
SEC61A2-201ENST00000298428 AAMPQ13685 434 aa23.55■■□□□ 1.36
SEC61A2-201ENST00000298428 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
SEC61A2-201ENST00000298428 G2E3Q7L622 706 aa23.53■■□□□ 1.36
SEC61A2-201ENST00000298428 CACNA1FO60840 1977 aa23.53■■□□□ 1.36
SEC61A2-201ENST00000298428 RGS12O14924 1447 aa23.53■■□□□ 1.36
SEC61A2-201ENST00000298428 ZNF496Q96IT1 587 aaPredicted RBP23.53■■□□□ 1.36
SEC61A2-201ENST00000298428 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
SEC61A2-201ENST00000298428 FMNL2Q96PY5 1086 aa23.51■■□□□ 1.35
SEC61A2-201ENST00000298428 TMOD3Q9NYL9 352 aa23.51■■□□□ 1.35
SEC61A2-201ENST00000298428 PAPPAQ13219 1627 aa23.51■■□□□ 1.35
SEC61A2-201ENST00000298428 FLIIQ13045 1269 aa23.51■■□□□ 1.35
SEC61A2-201ENST00000298428 FAM98CQ17RN3 349 aaKnown RBP23.5■■□□□ 1.35
SEC61A2-201ENST00000298428 CHPF2Q9P2E5 772 aa23.5■■□□□ 1.35
SEC61A2-201ENST00000298428 C5P01031 1676 aa23.49■■□□□ 1.35
SEC61A2-201ENST00000298428 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
SEC61A2-201ENST00000298428 AFF2P51816 1311 aa23.49■■□□□ 1.35
SEC61A2-201ENST00000298428 SNRPA1P09661 255 aaKnown RBP23.48■■□□□ 1.35
SEC61A2-201ENST00000298428 DBF4Q9UBU7 674 aaPredicted RBP23.48■■□□□ 1.35
SEC61A2-201ENST00000298428 UBR2Q8IWV8 1755 aa23.47■■□□□ 1.35
SEC61A2-201ENST00000298428 FKBP5Q13451 457 aaPredicted RBP23.47■■□□□ 1.35
SEC61A2-201ENST00000298428 GLI3P10071 1580 aa23.47■■□□□ 1.35
SEC61A2-201ENST00000298428 ITGB4P16144 1822 aa23.46■■□□□ 1.35
SEC61A2-201ENST00000298428 PIGBQ92521 554 aa23.46■■□□□ 1.35
SEC61A2-201ENST00000298428 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
SEC61A2-201ENST00000298428 KCPQ6ZWJ8 1503 aa23.46■■□□□ 1.35
SEC61A2-201ENST00000298428 INTS3Q68E01 1043 aaKnown RBP23.45■■□□□ 1.35
SEC61A2-201ENST00000298428 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.35
SEC61A2-201ENST00000298428 CHMP4BQ9H444 224 aaKnown RBP23.45■■□□□ 1.35
SEC61A2-201ENST00000298428 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
SEC61A2-201ENST00000298428 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
SEC61A2-201ENST00000298428 BCL9O00512 1426 aa23.44■■□□□ 1.34
SEC61A2-201ENST00000298428 F6X3S4 739 aa23.43■■□□□ 1.34
SEC61A2-201ENST00000298428 ANXA1P04083 346 aa23.43■■□□□ 1.34
SEC61A2-201ENST00000298428 KDM2BQ8NHM5 1336 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms