RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
ABCF3-201ENST00000292808 KCNQ3O43525 872 aa17.73■□□□□ 0.43
ABCF3-201ENST00000292808 SMC5Q8IY18 1101 aa17.73■□□□□ 0.43
ABCF3-201ENST00000292808 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
ABCF3-201ENST00000292808 SOS1Q07889 1333 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-201ENST00000292808 EIF4A1P60842 406 aaKnown RBP17.72■□□□□ 0.43
ABCF3-201ENST00000292808 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
ABCF3-201ENST00000292808 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
ABCF3-201ENST00000292808 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-201ENST00000292808 N4BP2Q86UW6 1770 aaPredicted RBP17.7■□□□□ 0.42
ABCF3-201ENST00000292808 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
ABCF3-201ENST00000292808 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
ABCF3-201ENST00000292808 NBR1Q14596 966 aa17.7■□□□□ 0.42
ABCF3-201ENST00000292808 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
ABCF3-201ENST00000292808 TEFQ10587 303 aa17.69■□□□□ 0.42
ABCF3-201ENST00000292808 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
ABCF3-201ENST00000292808 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
ABCF3-201ENST00000292808 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
ABCF3-201ENST00000292808 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
ABCF3-201ENST00000292808 CHMP4BQ9H444 224 aaKnown RBP17.69■□□□□ 0.42
ABCF3-201ENST00000292808 F6X3S4 739 aa17.68■□□□□ 0.42
ABCF3-201ENST00000292808 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
ABCF3-201ENST00000292808 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-201ENST00000292808 STK31Q9BXU1 1019 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 PRDM11Q9NQV5 511 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 FLIIQ13045 1269 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
ABCF3-201ENST00000292808 PHKG2P15735 406 aa17.66■□□□□ 0.42
ABCF3-201ENST00000292808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
ABCF3-201ENST00000292808 HDGFL1Q5TGJ6 251 aa17.66■□□□□ 0.42
ABCF3-201ENST00000292808 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
ABCF3-201ENST00000292808 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
ABCF3-201ENST00000292808 SEC24BO95487 1268 aa17.65■□□□□ 0.42
ABCF3-201ENST00000292808 MRC1P22897 1456 aa17.65■□□□□ 0.42
ABCF3-201ENST00000292808 HOXB7P09629 217 aa17.65■□□□□ 0.42
ABCF3-201ENST00000292808 MEIS3Q99687 375 aa17.65■□□□□ 0.42
ABCF3-201ENST00000292808 CYP27B1O15528 508 aa17.64■□□□□ 0.42
ABCF3-201ENST00000292808 NUCB1Q02818 461 aa17.64■□□□□ 0.41
ABCF3-201ENST00000292808 USP35Q9P2H5 1018 aa17.64■□□□□ 0.41
ABCF3-201ENST00000292808 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
ABCF3-201ENST00000292808 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
ABCF3-201ENST00000292808 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-201ENST00000292808 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-201ENST00000292808 SHANK3Q9BYB0 1731 aa17.63■□□□□ 0.41
ABCF3-201ENST00000292808 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
ABCF3-201ENST00000292808 C5P01031 1676 aa17.63■□□□□ 0.41
ABCF3-201ENST00000292808 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
ABCF3-201ENST00000292808 FKBP5Q13451 457 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-201ENST00000292808 SLC4A10Q6U841 1118 aa17.62■□□□□ 0.41
ABCF3-201ENST00000292808 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
ABCF3-201ENST00000292808 CCT4P50991 539 aaKnown RBP17.61■□□□□ 0.41
ABCF3-201ENST00000292808 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
ABCF3-201ENST00000292808 SLC52A2Q9HAB3 445 aa17.61■□□□□ 0.41
ABCF3-201ENST00000292808 CHPF2Q9P2E5 772 aa17.61■□□□□ 0.41
ABCF3-201ENST00000292808 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
ABCF3-201ENST00000292808 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-201ENST00000292808 CEP85Q6P2H3 762 aa17.6■□□□□ 0.41
ABCF3-201ENST00000292808 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
ABCF3-201ENST00000292808 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-201ENST00000292808 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
ABCF3-201ENST00000292808 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
ABCF3-201ENST00000292808 DAXXQ9UER7 740 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-201ENST00000292808 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
ABCF3-201ENST00000292808 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
ABCF3-201ENST00000292808 GLI3P10071 1580 aa17.59■□□□□ 0.41
ABCF3-201ENST00000292808 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
ABCF3-201ENST00000292808 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
ABCF3-201ENST00000292808 ANXA1P04083 346 aa17.58■□□□□ 0.41
ABCF3-201ENST00000292808 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
ABCF3-201ENST00000292808 LARP1Q6PKG0 1096 aaKnown RBP17.58■□□□□ 0.4
ABCF3-201ENST00000292808 NFATC2IPQ8NCF5 419 aa17.58■□□□□ 0.4
ABCF3-201ENST00000292808 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
ABCF3-201ENST00000292808 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
ABCF3-201ENST00000292808 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
ABCF3-201ENST00000292808 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-201ENST00000292808 CARD10Q9BWT7 1032 aa17.57■□□□□ 0.4
ABCF3-201ENST00000292808 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
ABCF3-201ENST00000292808 ADCY9O60503 1353 aa17.56■□□□□ 0.4
ABCF3-201ENST00000292808 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
ABCF3-201ENST00000292808 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
ABCF3-201ENST00000292808 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
ABCF3-201ENST00000292808 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
ABCF3-201ENST00000292808 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-201ENST00000292808 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
ABCF3-201ENST00000292808 USP44Q9H0E7 712 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 TOGARAM1Q9Y4F4 1720 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
ABCF3-201ENST00000292808 IL2RBP14784 551 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 PDIA6Q15084 440 aa17.53■□□□□ 0.4
ABCF3-201ENST00000292808 ZNF496Q96IT1 587 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-201ENST00000292808 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
ABCF3-201ENST00000292808 PAPPAQ13219 1627 aa17.52■□□□□ 0.39
ABCF3-201ENST00000292808 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.39
ABCF3-201ENST00000292808 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.39
ABCF3-201ENST00000292808 GNAI2P04899 355 aa17.52■□□□□ 0.39
ABCF3-201ENST00000292808 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms