RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 C1orf141Q5JVX7 400 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 AMIGO3Q86WK7 504 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 COL24A1Q17RW2 1714 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
SNF8-201ENST00000290330 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
SNF8-201ENST00000290330 CABP4P57796 275 aa14.17□□□□□ -0.14
SNF8-201ENST00000290330 CNGB1Q14028 1251 aaPredicted RBP14.17□□□□□ -0.14
SNF8-201ENST00000290330 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
SNF8-201ENST00000290330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
SNF8-201ENST00000290330 HMOX1P09601 288 aa14.16□□□□□ -0.14
SNF8-201ENST00000290330 YY1P25490 414 aa14.16□□□□□ -0.14
SNF8-201ENST00000290330 MSL1Q68DK7 614 aa14.16□□□□□ -0.14
SNF8-201ENST00000290330 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
SNF8-201ENST00000290330 PHF14O94880 888 aa14.15□□□□□ -0.14
SNF8-201ENST00000290330 SSFA2P28290 1259 aa14.15□□□□□ -0.14
SNF8-201ENST00000290330 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
SNF8-201ENST00000290330 NFATC2IPQ8NCF5 419 aa14.15□□□□□ -0.14
SNF8-201ENST00000290330 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
SNF8-201ENST00000290330 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
SNF8-201ENST00000290330 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
SNF8-201ENST00000290330 GNPATO15228 680 aa14.13□□□□□ -0.15
SNF8-201ENST00000290330 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
SNF8-201ENST00000290330 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
SNF8-201ENST00000290330 UBR3Q6ZT12 1888 aa14.12□□□□□ -0.15
SNF8-201ENST00000290330 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
SNF8-201ENST00000290330 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
SNF8-201ENST00000290330 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
SNF8-201ENST00000290330 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
SNF8-201ENST00000290330 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
SNF8-201ENST00000290330 GPR162Q16538 588 aa14.1□□□□□ -0.15
SNF8-201ENST00000290330 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
SNF8-201ENST00000290330 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
SNF8-201ENST00000290330 RTCBQ9Y3I0 505 aaKnown RBP14.1□□□□□ -0.15
SNF8-201ENST00000290330 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
SNF8-201ENST00000290330 CD2APQ9Y5K6 639 aa14.09□□□□□ -0.15
SNF8-201ENST00000290330 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
SNF8-201ENST00000290330 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
SNF8-201ENST00000290330 TRAPPC3LQ5T215 181 aa14.08□□□□□ -0.16
SNF8-201ENST00000290330 SCN11AQ9UI33 1791 aa14.07□□□□□ -0.16
SNF8-201ENST00000290330 PPP2R1AP30153 589 aa14.07□□□□□ -0.16
SNF8-201ENST00000290330 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
SNF8-201ENST00000290330 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
SNF8-201ENST00000290330 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
SNF8-201ENST00000290330 MRC1P22897 1456 aa14.06□□□□□ -0.16
SNF8-201ENST00000290330 UTRNP46939 3433 aa14.06□□□□□ -0.16
SNF8-201ENST00000290330 COL5A3P25940 1745 aaPredicted RBP14.05□□□□□ -0.16
SNF8-201ENST00000290330 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
SNF8-201ENST00000290330 SLC39A6Q13433 755 aa14.05□□□□□ -0.16
SNF8-201ENST00000290330 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 MMP10P09238 476 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.162e-6■■□□□ 12.9
SNF8-201ENST00000290330 RFC4P35249 363 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 NLGN1Q8N2Q7 840 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 GAS2L2Q8NHY3 880 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
SNF8-201ENST00000290330 GYS1P13807 737 aa14.03□□□□□ -0.16
SNF8-201ENST00000290330 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
SNF8-201ENST00000290330 INTS5Q6P9B9 1019 aaKnown RBP14.03□□□□□ -0.16
SNF8-201ENST00000290330 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
SNF8-201ENST00000290330 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
SNF8-201ENST00000290330 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
SNF8-201ENST00000290330 MYH14Q7Z406 1995 aaKnown RBP14.02□□□□□ -0.16
SNF8-201ENST00000290330 GRIN3BO60391 1043 aa14.02□□□□□ -0.17
SNF8-201ENST00000290330 ZNF784Q8NCA9 323 aaPredicted RBP14.02□□□□□ -0.17
SNF8-201ENST00000290330 TJP1Q07157 1748 aa14.01□□□□□ -0.17
SNF8-201ENST00000290330 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
SNF8-201ENST00000290330 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
SNF8-201ENST00000290330 CYP19A1P11511 503 aaPredicted RBP14.01□□□□□ -0.17
SNF8-201ENST00000290330 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNF8-201ENST00000290330 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
SNF8-201ENST00000290330 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
SNF8-201ENST00000290330 FCHSD2O94868 740 aa14□□□□□ -0.17
SNF8-201ENST00000290330 TEFQ10587 303 aa14□□□□□ -0.17
SNF8-201ENST00000290330 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
SNF8-201ENST00000290330 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
SNF8-201ENST00000290330 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
SNF8-201ENST00000290330 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
SNF8-201ENST00000290330 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
SNF8-201ENST00000290330 CHD4Q14839 1912 aa13.98□□□□□ -0.17
SNF8-201ENST00000290330 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
SNF8-201ENST00000290330 FKBP8Q14318 412 aa13.98□□□□□ -0.17
SNF8-201ENST00000290330 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
SNF8-201ENST00000290330 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
SNF8-201ENST00000290330 WWC3Q9ULE0 1092 aa13.98□□□□□ -0.17
SNF8-201ENST00000290330 GOLGB1Q14789 3259 aaKnown RBP13.98□□□□□ -0.17
SNF8-201ENST00000290330 TGFB2P61812 414 aa13.97□□□□□ -0.17
SNF8-201ENST00000290330 ZBTB1Q9Y2K1 713 aa13.97□□□□□ -0.17
SNF8-201ENST00000290330 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
SNF8-201ENST00000290330 VIRMAQ69YN4 1812 aaKnown RBP13.97□□□□□ -0.17
SNF8-201ENST00000290330 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
SNF8-201ENST00000290330 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.18
SNF8-201ENST00000290330 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
SNF8-201ENST00000290330 PXDNLA1KZ92 1463 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 ZPR1O75312 459 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 STARD3NLO95772 234 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 TM4SF1P30408 202 aa13.95□□□□□ -0.18
SNF8-201ENST00000290330 DDR1Q08345 913 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms