RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZGPATQ8N5A5 531 aaKnown RBP14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 NPATQ14207 1427 aa14.96□□□□□ -0.01
SLC6A1-201ENST00000287766 CASTP20810 708 aaKnown RBP14.96□□□□□ -0.01
SLC6A1-201ENST00000287766 MTHFSDQ2M296 383 aaKnown RBP14.96□□□□□ -0.01
SLC6A1-201ENST00000287766 TRERF1Q96PN7 1200 aa14.96□□□□□ -0.01
SLC6A1-201ENST00000287766 H0YHG0 523 aa14.96□□□□□ -0.02
SLC6A1-201ENST00000287766 INSRP06213 1382 aa14.96□□□□□ -0.02
SLC6A1-201ENST00000287766 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 CYP46A1Q9Y6A2 500 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 PRPF40BQ6NWY9 871 aaKnown RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 JARID2Q92833 1246 aaPredicted RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 CGNQ9P2M7 1197 aaKnown RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 PDE1AP54750 535 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 TSR1Q2NL82 804 aaKnown RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 WDR33Q9C0J8 1336 aaKnown RBP14.95□□□□□ -0.02
SLC6A1-201ENST00000287766 PI4KAP2A4QPH2 592 aa14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 PI4KAP1Q8N8J0 262 aa14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 BOLA2Q9H3K6 86 aa14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 DCTPP1Q9H773 170 aa14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 CWC15Q9P013 229 aaKnown RBP14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 WASHC4Q2M389 1173 aa14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 PRDM15P57071 1507 aaPredicted RBP14.94□□□□□ -0.02
SLC6A1-201ENST00000287766 PTPRCP08575 1304 aa14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 IL13P35225 146 aa14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 PDCL2Q8N4E4 241 aa14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 LARP1BQ659C4 914 aaKnown RBP14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 EVA1CP58658 441 aa14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 PROSER2Q86WR7 435 aaPredicted RBP14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
SLC6A1-201ENST00000287766 KIF1BPQ96EK5 621 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 TMX3Q96JJ7 454 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 PDRG1Q9NUG6 133 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 PPFIA3O75145 1194 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 CCDC112Q8NEF3 446 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 ABCC1P33527 1531 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 CPLX1O14810 134 aa14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 CALRP27797 417 aaKnown RBP14.92□□□□□ -0.02
SLC6A1-201ENST00000287766 TPM1P09493 284 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 RRAGDQ9NQL2 400 aaPredicted RBP14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 RIMS2Q9UQ26 1411 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 SNX21Q969T3 373 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 TCEANC2Q96MN5 208 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 CCDC70Q6NSX1 233 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 DNAAF4Q8WXU2 420 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 DDX11Q96FC9 970 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
SLC6A1-201ENST00000287766 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
SLC6A1-201ENST00000287766 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
SLC6A1-201ENST00000287766 PSMA5P28066 241 aa14.9□□□□□ -0.02
SLC6A1-201ENST00000287766 CAMK4Q16566 473 aa14.9□□□□□ -0.02
SLC6A1-201ENST00000287766 RAB3GAP1Q15042 981 aa14.9□□□□□ -0.02
SLC6A1-201ENST00000287766 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 EYA1Q99502 592 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 KDM5AP29375 1690 aaKnown RBP14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 IPO7O95373 1038 aaKnown RBP14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 ATF3P18847 181 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 KLHL40Q2TBA0 621 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 ZSCAN23Q3MJ62 389 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 CCDC73Q6ZRK6 1079 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
SLC6A1-201ENST00000287766 TTLL5Q6EMB2 1281 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 CHPF2Q9P2E5 772 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 MAP3K19Q56UN5 1328 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 RBM25P49756 843 aaKnown RBP14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 PHAXQ9H814 394 aaKnown RBP14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 MSH6P52701 1360 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 TRPM1Q7Z4N2 1603 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 USP26Q9BXU7 913 aa14.88□□□□□ -0.03
SLC6A1-201ENST00000287766 PIP4K2AP48426 406 aaPredicted RBP14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 ERC1Q8IUD2 1116 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 GLRX3O76003 335 aaKnown RBP14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 ESYT1Q9BSJ8 1104 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 USP25Q9UHP3 1055 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 USP19O94966 1318 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
SLC6A1-201ENST00000287766 PDILTQ8N807 584 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 STRN4Q9NRL3 753 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 MAP3K2Q9Y2U5 619 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 CD2BP2O95400 341 aaKnown RBP14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 RAB11FIP3O75154 756 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 TATP17735 454 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms