RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PALD1Q9ULE6 856 aa16.1■□□□□ 0.17
SCAF4-201ENST00000286835 CEP152O94986 1710 aa16.1■□□□□ 0.17
SCAF4-201ENST00000286835 EVA1CP58658 441 aa16.1■□□□□ 0.17
SCAF4-201ENST00000286835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■□□□ 14.1
SCAF4-201ENST00000286835 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
SCAF4-201ENST00000286835 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
SCAF4-201ENST00000286835 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
SCAF4-201ENST00000286835 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
SCAF4-201ENST00000286835 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
SCAF4-201ENST00000286835 GOLGA6L6A8MZA4 724 aa16.09■□□□□ 0.17
SCAF4-201ENST00000286835 CAMK4Q16566 473 aa16.09■□□□□ 0.17
SCAF4-201ENST00000286835 SRGAP3O43295 1099 aa16.08■□□□□ 0.17
SCAF4-201ENST00000286835 CPA1P15085 419 aa16.08■□□□□ 0.17
SCAF4-201ENST00000286835 KIF1BO60333 1816 aa16.08■□□□□ 0.17
SCAF4-201ENST00000286835 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.16
SCAF4-201ENST00000286835 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
SCAF4-201ENST00000286835 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
SCAF4-201ENST00000286835 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.16
SCAF4-201ENST00000286835 MYOM1P52179 1685 aa16.08■□□□□ 0.16
SCAF4-201ENST00000286835 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
SCAF4-201ENST00000286835 TET3O43151 1660 aa16.07■□□□□ 0.16
SCAF4-201ENST00000286835 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
SCAF4-201ENST00000286835 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
SCAF4-201ENST00000286835 FLIIQ13045 1269 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 STK3Q13188 491 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
SCAF4-201ENST00000286835 CNTROBQ8N137 903 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
SCAF4-201ENST00000286835 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
SCAF4-201ENST00000286835 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
SCAF4-201ENST00000286835 PTPRCP08575 1304 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 RIMS2Q9UQ26 1411 aa16.06■□□□□ 0.16
SCAF4-201ENST00000286835 IFIT2P09913 472 aaKnown RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 NPHP1O15259 732 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 HS1BP3Q53T59 392 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 MTERF4Q7Z6M4 381 aaKnown RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 JARID2Q92833 1246 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 DYNC1I1O14576 645 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 CHMLP26374 656 aa16.05■□□□□ 0.16
SCAF4-201ENST00000286835 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
SCAF4-201ENST00000286835 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.162e-7■■□□□ 13.6
SCAF4-201ENST00000286835 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
SCAF4-201ENST00000286835 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
SCAF4-201ENST00000286835 ANXA1P04083 346 aa16.04■□□□□ 0.16
SCAF4-201ENST00000286835 HMGN5P82970 282 aaKnown RBP16.04■□□□□ 0.16
SCAF4-201ENST00000286835 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
SCAF4-201ENST00000286835 HSPA2P54652 639 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 PRPF40BQ6NWY9 871 aaKnown RBP16.03■□□□□ 0.16
SCAF4-201ENST00000286835 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 RTL1A6NKG5 1358 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 STX6O43752 255 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 MCM5P33992 734 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
SCAF4-201ENST00000286835 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
SCAF4-201ENST00000286835 NEO1Q92859 1461 aa16.02■□□□□ 0.16
SCAF4-201ENST00000286835 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.15
SCAF4-201ENST00000286835 AIMP1Q12904 312 aaKnown RBP16.02■□□□□ 0.15
SCAF4-201ENST00000286835 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.15
SCAF4-201ENST00000286835 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.15
SCAF4-201ENST00000286835 NECAB1Q8N987 351 aa16.02■□□□□ 0.15
SCAF4-201ENST00000286835 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.15
SCAF4-201ENST00000286835 BRD1O95696 1058 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 QRICH2Q9H0J4 1663 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 ZNF500O60304 480 aaPredicted RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 IGSF3O75054 1194 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 PPP1R42Q7Z4L9 355 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 PDRG1Q9NUG6 133 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 H3BQV1 296 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 TFIP11Q9UBB9 837 aaKnown RBP16.01■□□□□ 0.15
SCAF4-201ENST00000286835 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
SCAF4-201ENST00000286835 ACEP12821 1306 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 CHL1O00533 1208 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
SCAF4-201ENST00000286835 PPP4R3BQ5MIZ7 849 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 CCDC192P0DO97 292 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 SIL1Q9H173 461 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 LIMCH1Q9UPQ0 1083 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 GJB2P29033 226 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 STRN4Q9NRL3 753 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 CYP46A1Q9Y6A2 500 aa16■□□□□ 0.15
SCAF4-201ENST00000286835 GOLGA6L19H0YKK7 550 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms