RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 EVA1CP58658 441 aa18.43■□□□□ 0.54
MSI2-201ENST00000284073 MCM6Q14566 821 aa18.43■□□□□ 0.54
MSI2-201ENST00000284073 C10orf67Q8IYJ2 551 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 SSBP05455 408 aaKnown RBP eCLIP18.42■□□□□ 0.54
MSI2-201ENST00000284073 CCDC158Q5M9N0 1113 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 ISM2Q6H9L7 571 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 TBC1D9Q6ZT07 1266 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 MICALL1Q8N3F8 863 aa18.42■□□□□ 0.54
MSI2-201ENST00000284073 NOL7Q9UMY1 257 aaKnown RBP18.42■□□□□ 0.54
MSI2-201ENST00000284073 VGLL3A8MV65 326 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 ZNF397Q8NF99 534 aaPredicted RBP18.41■□□□□ 0.54
MSI2-201ENST00000284073 CCDC12Q8WUD4 166 aaPredicted RBP18.41■□□□□ 0.54
MSI2-201ENST00000284073 PIBF1Q8WXW3 757 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 MX1P20591 662 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
MSI2-201ENST00000284073 KRT32Q14532 448 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 CCDC175P0C221 793 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 PRIM1P49642 420 aaKnown RBP18.41■□□□□ 0.54
MSI2-201ENST00000284073 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
MSI2-201ENST00000284073 SMAP1Q8IYB5 467 aaPredicted RBP18.41■□□□□ 0.54
MSI2-201ENST00000284073 NUP88Q99567 741 aaPredicted RBP18.41■□□□□ 0.54
MSI2-201ENST00000284073 POTEB2H3BUK9 544 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 SPECC1Q5M775 1068 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 DDX19AQ9NUU7 478 aaKnown RBP18.4■□□□□ 0.54
MSI2-201ENST00000284073 FSIP1Q8NA03 581 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 CDKL5O76039 1030 aa18.4■□□□□ 0.54
MSI2-201ENST00000284073 PDIA4P13667 645 aaKnown RBP18.4■□□□□ 0.54
MSI2-201ENST00000284073 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
MSI2-201ENST00000284073 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 HLTFQ14527 1009 aaKnown RBP eCLIP18.39■□□□□ 0.539e-8■□□□□ 11.3
MSI2-201ENST00000284073 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 STX6O43752 255 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 19.7
MSI2-201ENST00000284073 ARFGAP3Q9NP61 516 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 PAFAH1B1P43034 410 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 DNAI1Q9UI46 699 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 SKILP12757 684 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 STX1AQ16623 288 aa18.39■□□□□ 0.53
MSI2-201ENST00000284073 GJB2P29033 226 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 RAPGEF4Q8WZA2 1011 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 CAPN2P17655 700 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 PSME1Q06323 249 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
MSI2-201ENST00000284073 CTAGE5O15320 804 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 IVLP07476 585 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 UBE2HP62256 183 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 CCDC171Q6TFL3 1326 aa18.38■□□□□ 0.53
MSI2-201ENST00000284073 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
MSI2-201ENST00000284073 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■■■■□ 21.1
MSI2-201ENST00000284073 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
MSI2-201ENST00000284073 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
MSI2-201ENST00000284073 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
MSI2-201ENST00000284073 PLEKHH1Q9ULM0 1364 aa18.36■□□□□ 0.53
MSI2-201ENST00000284073 SMC1AQ14683 1233 aaKnown RBP18.36■□□□□ 0.53
MSI2-201ENST00000284073 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
MSI2-201ENST00000284073 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
MSI2-201ENST00000284073 SSR1P43307 286 aaKnown RBP18.35■□□□□ 0.53
MSI2-201ENST00000284073 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
MSI2-201ENST00000284073 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
MSI2-201ENST00000284073 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
MSI2-201ENST00000284073 NLRP6P59044 892 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 LRPPRCP42704 1394 aaKnown RBP18.34■□□□□ 0.53
MSI2-201ENST00000284073 ANO6Q4KMQ2 910 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
MSI2-201ENST00000284073 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 CNNM3Q8NE01 707 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 SLU7O95391 586 aaKnown RBP18.34■□□□□ 0.53
MSI2-201ENST00000284073 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
MSI2-201ENST00000284073 CACNA2D4Q7Z3S7 1137 aa18.33■□□□□ 0.53
MSI2-201ENST00000284073 C8orf76Q96K31 380 aa18.33■□□□□ 0.53
MSI2-201ENST00000284073 OGFRQ9NZT2 677 aa18.33■□□□□ 0.53
MSI2-201ENST00000284073 YEATS4O95619 227 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
MSI2-201ENST00000284073 CCDC91Q7Z6B0 441 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 USP48Q86UV5 1035 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSI2-201ENST00000284073 ERBINQ96RT1 1412 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 RASSF4Q9H2L5 321 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 JADE2Q9NQC1 790 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 VPS18Q9P253 973 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
MSI2-201ENST00000284073 PHACTR2O75167 634 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 HSPA4P34932 840 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 STAC3Q96MF2 364 aa18.32■□□□□ 0.52
MSI2-201ENST00000284073 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms