RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 CSB-PGBD3P0DP91 1061 aa12.01□□□□□ -0.49
PDCD4-201ENST00000280154 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
PDCD4-201ENST00000280154 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
PDCD4-201ENST00000280154 NME9Q86XW9 330 aa12.01□□□□□ -0.49
PDCD4-201ENST00000280154 EXOC8Q8IYI6 725 aa12.01□□□□□ -0.49
PDCD4-201ENST00000280154 CARNS1A5YM72 827 aa12□□□□□ -0.49
PDCD4-201ENST00000280154 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
PDCD4-201ENST00000280154 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
PDCD4-201ENST00000280154 BCL9O00512 1426 aa12□□□□□ -0.49
PDCD4-201ENST00000280154 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
PDCD4-201ENST00000280154 RREB1Q92766 1687 aa11.99□□□□□ -0.49
PDCD4-201ENST00000280154 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
PDCD4-201ENST00000280154 ATL2Q8NHH9 583 aa11.99□□□□□ -0.49
PDCD4-201ENST00000280154 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
PDCD4-201ENST00000280154 SLC24A3Q9HC58 644 aa11.99□□□□□ -0.49
PDCD4-201ENST00000280154 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
PDCD4-201ENST00000280154 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
PDCD4-201ENST00000280154 MAFGO15525 162 aa11.98□□□□□ -0.49
PDCD4-201ENST00000280154 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
PDCD4-201ENST00000280154 IL13P35225 146 aa11.98□□□□□ -0.49
PDCD4-201ENST00000280154 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
PDCD4-201ENST00000280154 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
PDCD4-201ENST00000280154 ATRNO75882 1429 aa11.97□□□□□ -0.49
PDCD4-201ENST00000280154 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
PDCD4-201ENST00000280154 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
PDCD4-201ENST00000280154 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
PDCD4-201ENST00000280154 IP6K1Q92551 441 aa11.97□□□□□ -0.49
PDCD4-201ENST00000280154 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
PDCD4-201ENST00000280154 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
PDCD4-201ENST00000280154 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
PDCD4-201ENST00000280154 COG3Q96JB2 828 aa11.96□□□□□ -0.49
PDCD4-201ENST00000280154 RIPOR2Q9Y4F9 1068 aa11.96□□□□□ -0.49
PDCD4-201ENST00000280154 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
PDCD4-201ENST00000280154 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.5
PDCD4-201ENST00000280154 FOXO3O43524 673 aa11.96□□□□□ -0.5
PDCD4-201ENST00000280154 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.5
PDCD4-201ENST00000280154 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.5
PDCD4-201ENST00000280154 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
PDCD4-201ENST00000280154 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
PDCD4-201ENST00000280154 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
PDCD4-201ENST00000280154 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
PDCD4-201ENST00000280154 GCP02774 474 aa11.95□□□□□ -0.5
PDCD4-201ENST00000280154 HOXC9P31274 260 aa11.94□□□□□ -0.5
PDCD4-201ENST00000280154 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
PDCD4-201ENST00000280154 IRF6O14896 467 aa11.94□□□□□ -0.5
PDCD4-201ENST00000280154 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
PDCD4-201ENST00000280154 ANP32CO43423 234 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 GET4Q7L5D6 327 aaPredicted RBP11.93□□□□□ -0.5
PDCD4-201ENST00000280154 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
PDCD4-201ENST00000280154 ZNF521Q96K83 1311 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 ITGB4P16144 1822 aa11.93□□□□□ -0.5
PDCD4-201ENST00000280154 MIER1Q8N108 512 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 CRB1P82279 1406 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 IRF5Q13568 498 aa11.92□□□□□ -0.5
PDCD4-201ENST00000280154 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 ERBB3P21860 1342 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 RINLQ6ZS11 566 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 LY75O60449 1722 aa11.91□□□□□ -0.5
PDCD4-201ENST00000280154 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
PDCD4-201ENST00000280154 PAX3P23760 479 aa11.9□□□□□ -0.5
PDCD4-201ENST00000280154 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
PDCD4-201ENST00000280154 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
PDCD4-201ENST00000280154 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
PDCD4-201ENST00000280154 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
PDCD4-201ENST00000280154 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
PDCD4-201ENST00000280154 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
PDCD4-201ENST00000280154 MTHFSP49914 203 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 GOLIM4O00461 696 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-201ENST00000280154 NLRP6P59044 892 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-201ENST00000280154 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
PDCD4-201ENST00000280154 MEGF6O75095 1541 aa11.88□□□□□ -0.51
PDCD4-201ENST00000280154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.515e-8■□□□□ 10.4
PDCD4-201ENST00000280154 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 RETREG2Q8NC44 543 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 TPD52L2O43399 206 aaKnown RBP11.87□□□□□ -0.51
PDCD4-201ENST00000280154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDCD4-201ENST00000280154 COL24A1Q17RW2 1714 aa11.87□□□□□ -0.51
PDCD4-201ENST00000280154 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 CCDC181Q5TID7 509 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 PPME1Q9Y570 386 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 FCHSD2O94868 740 aa11.86□□□□□ -0.51
PDCD4-201ENST00000280154 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
PDCD4-201ENST00000280154 AXIN2Q9Y2T1 843 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms