RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
RPS3-201ENST00000278572 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
RPS3-201ENST00000278572 CABP4P57796 275 aa20.08■□□□□ 0.81
RPS3-201ENST00000278572 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
RPS3-201ENST00000278572 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
RPS3-201ENST00000278572 TAF1LQ8IZX4 1826 aa20.07■□□□□ 0.8
RPS3-201ENST00000278572 GNPATO15228 680 aa20.07■□□□□ 0.8
RPS3-201ENST00000278572 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
RPS3-201ENST00000278572 MTHFSP49914 203 aa20.07■□□□□ 0.8
RPS3-201ENST00000278572 ITPK1Q13572 414 aa20.07■□□□□ 0.8
RPS3-201ENST00000278572 NLGN2Q8NFZ4 835 aa20.07■□□□□ 0.8
RPS3-201ENST00000278572 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
RPS3-201ENST00000278572 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
RPS3-201ENST00000278572 CC2D1BQ5T0F9 858 aaKnown RBP20.05■□□□□ 0.8
RPS3-201ENST00000278572 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
RPS3-201ENST00000278572 NPC1L1Q9UHC9 1359 aa20.05■□□□□ 0.8
RPS3-201ENST00000278572 CD2APQ9Y5K6 639 aa20.04■□□□□ 0.8
RPS3-201ENST00000278572 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.8
RPS3-201ENST00000278572 GRIN3BO60391 1043 aa20.01■□□□□ 0.79
RPS3-201ENST00000278572 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
RPS3-201ENST00000278572 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
RPS3-201ENST00000278572 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
RPS3-201ENST00000278572 RTCBQ9Y3I0 505 aaKnown RBP20.01■□□□□ 0.79
RPS3-201ENST00000278572 UBR3Q6ZT12 1888 aa20.01■□□□□ 0.79
RPS3-201ENST00000278572 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
RPS3-201ENST00000278572 ADRA2BP18089 450 aa20■□□□□ 0.79
RPS3-201ENST00000278572 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
RPS3-201ENST00000278572 HMOX1P09601 288 aa19.99■□□□□ 0.79
RPS3-201ENST00000278572 TRAPPC3LQ5T215 181 aa19.99■□□□□ 0.79
RPS3-201ENST00000278572 RC3H1Q5TC82 1133 aaKnown RBP19.99■□□□□ 0.79
RPS3-201ENST00000278572 NFATC2IPQ8NCF5 419 aa19.99■□□□□ 0.79
RPS3-201ENST00000278572 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
RPS3-201ENST00000278572 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
RPS3-201ENST00000278572 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.796e-77■□□□□ 9.7
RPS3-201ENST00000278572 RPS6KA4O75676 772 aa19.95■□□□□ 0.78
RPS3-201ENST00000278572 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
RPS3-201ENST00000278572 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
RPS3-201ENST00000278572 MMP10P09238 476 aa19.94■□□□□ 0.78
RPS3-201ENST00000278572 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
RPS3-201ENST00000278572 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
RPS3-201ENST00000278572 MRC1P22897 1456 aa19.93■□□□□ 0.78
RPS3-201ENST00000278572 RFC4P35249 363 aa19.93■□□□□ 0.78
RPS3-201ENST00000278572 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
RPS3-201ENST00000278572 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
RPS3-201ENST00000278572 U2SURPO15042 1029 aaKnown RBP19.92■□□□□ 0.78
RPS3-201ENST00000278572 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
RPS3-201ENST00000278572 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
RPS3-201ENST00000278572 CHD4Q14839 1912 aa19.92■□□□□ 0.78
RPS3-201ENST00000278572 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
RPS3-201ENST00000278572 COL5A3P25940 1745 aaPredicted RBP19.9■□□□□ 0.78
RPS3-201ENST00000278572 CFAP53Q96M91 514 aa19.9■□□□□ 0.78
RPS3-201ENST00000278572 GYS1P13807 737 aa19.89■□□□□ 0.77
RPS3-201ENST00000278572 GAS2L2Q8NHY3 880 aa19.89■□□□□ 0.77
RPS3-201ENST00000278572 CICQ96RK0 1608 aaPredicted RBP19.88■□□□□ 0.77
RPS3-201ENST00000278572 SCN11AQ9UI33 1791 aa19.88■□□□□ 0.77
RPS3-201ENST00000278572 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
RPS3-201ENST00000278572 PARP3Q9Y6F1 533 aa19.87■□□□□ 0.77
RPS3-201ENST00000278572 C10orf71Q711Q0 1435 aa19.86■□□□□ 0.77
RPS3-201ENST00000278572 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
RPS3-201ENST00000278572 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
RPS3-201ENST00000278572 TGFB2P61812 414 aa19.85■□□□□ 0.77
RPS3-201ENST00000278572 SLC39A6Q13433 755 aa19.85■□□□□ 0.77
RPS3-201ENST00000278572 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
RPS3-201ENST00000278572 TJP1Q07157 1748 aa19.85■□□□□ 0.77
RPS3-201ENST00000278572 ADAMTS7Q9UKP4 1686 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 GNAT3A8MTJ3 354 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 TEFQ10587 303 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
RPS3-201ENST00000278572 TTC5Q8N0Z6 440 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 VSIG10Q8N0Z9 540 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 WWC3Q9ULE0 1092 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
RPS3-201ENST00000278572 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
RPS3-201ENST00000278572 SRP68Q9UHB9 627 aaKnown RBP19.83■□□□□ 0.77
RPS3-201ENST00000278572 SOS1Q07889 1333 aaPredicted RBP19.82■□□□□ 0.76
RPS3-201ENST00000278572 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
RPS3-201ENST00000278572 CYP19A1P11511 503 aaPredicted RBP19.82■□□□□ 0.76
RPS3-201ENST00000278572 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
RPS3-201ENST00000278572 ZPR1O75312 459 aa19.81■□□□□ 0.76
RPS3-201ENST00000278572 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
RPS3-201ENST00000278572 PRKAR2BP31323 418 aa19.81■□□□□ 0.76
RPS3-201ENST00000278572 MYH14Q7Z406 1995 aaKnown RBP19.81■□□□□ 0.76
RPS3-201ENST00000278572 ATP10DQ9P241 1426 aa19.8■□□□□ 0.76
RPS3-201ENST00000278572 FKBP8Q14318 412 aa19.8■□□□□ 0.76
RPS3-201ENST00000278572 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
RPS3-201ENST00000278572 STARD3NLO95772 234 aa19.79■□□□□ 0.76
RPS3-201ENST00000278572 C1QTNF8P60827 252 aa19.79■□□□□ 0.76
RPS3-201ENST00000278572 IL17REQ8NFR9 667 aa19.79■□□□□ 0.76
RPS3-201ENST00000278572 ZBTB1Q9Y2K1 713 aa19.79■□□□□ 0.76
RPS3-201ENST00000278572 COL15A1P39059 1388 aa19.79■□□□□ 0.76
RPS3-201ENST00000278572 U2AF1L5P0DN76 240 aaPredicted RBP19.78■□□□□ 0.76
RPS3-201ENST00000278572 U2AF1Q01081 240 aaKnown RBP eCLIP19.78■□□□□ 0.76
RPS3-201ENST00000278572 ADCY9O60503 1353 aa19.78■□□□□ 0.76
RPS3-201ENST00000278572 A0A0G2JLW4 131 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 DDR1Q08345 913 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 USPL1Q5W0Q7 1092 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 BCS1LQ9Y276 419 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 CEMIPQ8WUJ3 1361 aa19.77■□□□□ 0.76
RPS3-201ENST00000278572 DPEP1P16444 411 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms