RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 CACNA1FO60840 1977 aa18.57■□□□□ 0.56
TRIM23-202ENST00000274327 MRC1P22897 1456 aa18.56■□□□□ 0.56
TRIM23-202ENST00000274327 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
TRIM23-202ENST00000274327 CYP27B1O15528 508 aa18.56■□□□□ 0.56
TRIM23-202ENST00000274327 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
TRIM23-202ENST00000274327 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
TRIM23-202ENST00000274327 IL2RBP14784 551 aa18.54■□□□□ 0.56
TRIM23-202ENST00000274327 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
TRIM23-202ENST00000274327 CERKQ8TCT0 537 aa18.53■□□□□ 0.56
TRIM23-202ENST00000274327 ABCC4O15439 1325 aa18.53■□□□□ 0.56
TRIM23-202ENST00000274327 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
TRIM23-202ENST00000274327 TMEM57Q8N5G2 664 aa18.53■□□□□ 0.56
TRIM23-202ENST00000274327 KDM2BQ8NHM5 1336 aa18.53■□□□□ 0.56
TRIM23-202ENST00000274327 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
TRIM23-202ENST00000274327 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
TRIM23-202ENST00000274327 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
TRIM23-202ENST00000274327 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
TRIM23-202ENST00000274327 DCAF5Q96JK2 942 aa18.52■□□□□ 0.56
TRIM23-202ENST00000274327 API5Q9BZZ5 524 aaKnown RBP18.52■□□□□ 0.56
TRIM23-202ENST00000274327 KCNQ3O43525 872 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 HOXB7P09629 217 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 SLC52A2Q9HAB3 445 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 NWD2Q9ULI1 1742 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 DISP2A7MBM2 1401 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 RGS12O14924 1447 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 HEG1Q9ULI3 1381 aa18.51■□□□□ 0.55
TRIM23-202ENST00000274327 PTPRCP08575 1304 aa18.5■□□□□ 0.55
TRIM23-202ENST00000274327 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
TRIM23-202ENST00000274327 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
TRIM23-202ENST00000274327 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
TRIM23-202ENST00000274327 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
TRIM23-202ENST00000274327 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
TRIM23-202ENST00000274327 JCADQ9P266 1359 aa18.48■□□□□ 0.55
TRIM23-202ENST00000274327 ADAMTS2O95450 1211 aa18.48■□□□□ 0.55
TRIM23-202ENST00000274327 SLIT2O94813 1529 aa18.47■□□□□ 0.55
TRIM23-202ENST00000274327 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
TRIM23-202ENST00000274327 G2E3Q7L622 706 aa18.46■□□□□ 0.55
TRIM23-202ENST00000274327 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
TRIM23-202ENST00000274327 CHMP4AQ9BY43 222 aa18.46■□□□□ 0.55
TRIM23-202ENST00000274327 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
TRIM23-202ENST00000274327 NUTM2BA6NNL0 878 aaPredicted RBP18.45■□□□□ 0.54
TRIM23-202ENST00000274327 NUTM2EB1AL46 878 aaPredicted RBP18.45■□□□□ 0.54
TRIM23-202ENST00000274327 HDGFL1Q5TGJ6 251 aa18.45■□□□□ 0.54
TRIM23-202ENST00000274327 NUTM2AQ8IVF1 878 aaPredicted RBP18.45■□□□□ 0.54
TRIM23-202ENST00000274327 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
TRIM23-202ENST00000274327 TOGARAM1Q9Y4F4 1720 aa18.45■□□□□ 0.54
TRIM23-202ENST00000274327 INTS3Q68E01 1043 aaKnown RBP18.44■□□□□ 0.54
TRIM23-202ENST00000274327 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
TRIM23-202ENST00000274327 USP35Q9P2H5 1018 aa18.44■□□□□ 0.54
TRIM23-202ENST00000274327 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
TRIM23-202ENST00000274327 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
TRIM23-202ENST00000274327 PAPPAQ13219 1627 aa18.43■□□□□ 0.54
TRIM23-202ENST00000274327 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
TRIM23-202ENST00000274327 C5P01031 1676 aa18.43■□□□□ 0.54
TRIM23-202ENST00000274327 ZBTB7BO15156 539 aaPredicted RBP18.43■□□□□ 0.54
TRIM23-202ENST00000274327 IGHDP01880 384 aa18.43■□□□□ 0.54
TRIM23-202ENST00000274327 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
TRIM23-202ENST00000274327 CABP4P57796 275 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 NECTIN2Q92692 538 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 GLI3P10071 1580 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 SPATA31A1Q5TZJ5 1347 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 FLIIQ13045 1269 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
TRIM23-202ENST00000274327 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
TRIM23-202ENST00000274327 DDX54Q8TDD1 881 aaKnown RBP18.41■□□□□ 0.54
TRIM23-202ENST00000274327 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
TRIM23-202ENST00000274327 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
TRIM23-202ENST00000274327 LRP6O75581 1613 aa18.4■□□□□ 0.54
TRIM23-202ENST00000274327 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.54
TRIM23-202ENST00000274327 SPATA31A5Q5VU36 1347 aa18.39■□□□□ 0.54
TRIM23-202ENST00000274327 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.54
TRIM23-202ENST00000274327 SPATA31A7Q8IWB4 1347 aa18.39■□□□□ 0.54
TRIM23-202ENST00000274327 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
TRIM23-202ENST00000274327 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.53
TRIM23-202ENST00000274327 LAMB4A4D0S4 1761 aa18.38■□□□□ 0.53
TRIM23-202ENST00000274327 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
TRIM23-202ENST00000274327 ITGB4P16144 1822 aa18.38■□□□□ 0.53
TRIM23-202ENST00000274327 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
TRIM23-202ENST00000274327 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
TRIM23-202ENST00000274327 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
TRIM23-202ENST00000274327 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
TRIM23-202ENST00000274327 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
TRIM23-202ENST00000274327 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
TRIM23-202ENST00000274327 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
TRIM23-202ENST00000274327 F6X3S4 739 aa18.36■□□□□ 0.53
TRIM23-202ENST00000274327 CCT4P50991 539 aaKnown RBP18.36■□□□□ 0.53
TRIM23-202ENST00000274327 FKBP5Q13451 457 aaPredicted RBP18.36■□□□□ 0.53
TRIM23-202ENST00000274327 UNC5CLQ8IV45 518 aa18.36■□□□□ 0.53
TRIM23-202ENST00000274327 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
TRIM23-202ENST00000274327 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
TRIM23-202ENST00000274327 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.36■□□□□ 0.53
TRIM23-202ENST00000274327 EXOC5O00471 708 aa18.35■□□□□ 0.53
TRIM23-202ENST00000274327 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
TRIM23-202ENST00000274327 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
TRIM23-202ENST00000274327 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
TRIM23-202ENST00000274327 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
TRIM23-202ENST00000274327 HSPA1LP34931 641 aa18.33■□□□□ 0.53
TRIM23-202ENST00000274327 PDIA6Q15084 440 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms