RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 KDM6AO15550 1401 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-201ENST00000266589 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
SCAF11-201ENST00000266589 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
SCAF11-201ENST00000266589 ZBTB40Q9NUA8 1239 aa14.67□□□□□ -0.06
SCAF11-201ENST00000266589 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
SCAF11-201ENST00000266589 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-201ENST00000266589 CACNA1FO60840 1977 aa14.67□□□□□ -0.06
SCAF11-201ENST00000266589 EIF4A1P60842 406 aaKnown RBP14.67□□□□□ -0.06
SCAF11-201ENST00000266589 IFNL2Q8IZJ0 200 aa14.67□□□□□ -0.06
SCAF11-201ENST00000266589 KCNQ3O43525 872 aa14.66□□□□□ -0.06
SCAF11-201ENST00000266589 EVA1CP58658 441 aa14.66□□□□□ -0.06
SCAF11-201ENST00000266589 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-201ENST00000266589 LARP1Q6PKG0 1096 aaKnown RBP14.65□□□□□ -0.06
SCAF11-201ENST00000266589 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
SCAF11-201ENST00000266589 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
SCAF11-201ENST00000266589 ZBTB7BO15156 539 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-201ENST00000266589 CYP27B1O15528 508 aa14.65□□□□□ -0.06
SCAF11-201ENST00000266589 G2E3Q7L622 706 aa14.65□□□□□ -0.06
SCAF11-201ENST00000266589 CARD10Q9BWT7 1032 aa14.65□□□□□ -0.06
SCAF11-201ENST00000266589 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
SCAF11-201ENST00000266589 HDGFL1Q5TGJ6 251 aa14.64□□□□□ -0.07
SCAF11-201ENST00000266589 HOXB7P09629 217 aa14.64□□□□□ -0.07
SCAF11-201ENST00000266589 INTS3Q68E01 1043 aaKnown RBP14.64□□□□□ -0.07
SCAF11-201ENST00000266589 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 MRC1P22897 1456 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 TOM1O60784 492 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 DCAF5Q96JK2 942 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 SLC52A2Q9HAB3 445 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
SCAF11-201ENST00000266589 HSP90AB1P08238 724 aaKnown RBP14.62□□□□□ -0.07
SCAF11-201ENST00000266589 IL2RBP14784 551 aa14.62□□□□□ -0.07
SCAF11-201ENST00000266589 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
SCAF11-201ENST00000266589 FLIIQ13045 1269 aa14.62□□□□□ -0.07
SCAF11-201ENST00000266589 HDAC1Q13547 482 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-201ENST00000266589 PCDH11XQ9BZA7 1347 aa14.62□□□□□ -0.07
SCAF11-201ENST00000266589 PCDH11YQ9BZA8 1340 aa14.62□□□□□ -0.07
SCAF11-201ENST00000266589 EIF2S2P20042 333 aaKnown RBP14.61□□□□□ -0.07
SCAF11-201ENST00000266589 ZCRB1Q8TBF4 217 aaKnown RBP14.61□□□□□ -0.07
SCAF11-201ENST00000266589 RGS3P49796 1198 aa14.61□□□□□ -0.07
SCAF11-201ENST00000266589 C1orf115Q9H7X2 142 aa14.61□□□□□ -0.07
SCAF11-201ENST00000266589 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 PLCH1Q4KWH8 1693 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 N4BP2Q86UW6 1770 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-201ENST00000266589 F6X3S4 739 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 FKBP5Q13451 457 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-201ENST00000266589 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 CHMP4AQ9BY43 222 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
SCAF11-201ENST00000266589 GIGYF1O75420 1035 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-201ENST00000266589 SLC4A10Q6U841 1118 aa14.59□□□□□ -0.07
SCAF11-201ENST00000266589 C5P01031 1676 aa14.59□□□□□ -0.07
SCAF11-201ENST00000266589 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
SCAF11-201ENST00000266589 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
SCAF11-201ENST00000266589 CHPF2Q9P2E5 772 aa14.59□□□□□ -0.07
SCAF11-201ENST00000266589 CCT4P50991 539 aaKnown RBP14.57□□□□□ -0.08
SCAF11-201ENST00000266589 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
SCAF11-201ENST00000266589 PDZRN3Q9UPQ7 1066 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 PXDNLA1KZ92 1463 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 UBAP1LF5GYI3 381 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 CABP4P57796 275 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 WNK3Q9BYP7 1800 aa14.57□□□□□ -0.08
SCAF11-201ENST00000266589 NRAPQ86VF7 1730 aa14.56□□□□□ -0.08
SCAF11-201ENST00000266589 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
SCAF11-201ENST00000266589 PDE4AP27815 886 aa14.56□□□□□ -0.08
SCAF11-201ENST00000266589 SMC5Q8IY18 1101 aa14.56□□□□□ -0.08
SCAF11-201ENST00000266589 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
SCAF11-201ENST00000266589 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
SCAF11-201ENST00000266589 MEIS3Q99687 375 aa14.55□□□□□ -0.08
SCAF11-201ENST00000266589 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-201ENST00000266589 ANXA1P04083 346 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 NKX1-1Q15270 411 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-201ENST00000266589 TOGARAM1Q9Y4F4 1720 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 DISP2A7MBM2 1401 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 ATP10DQ9P241 1426 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-201ENST00000266589 BACH2Q9BYV9 841 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 PAPPAQ13219 1627 aa14.54□□□□□ -0.08
SCAF11-201ENST00000266589 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-201ENST00000266589 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-201ENST00000266589 ERVV-2B6SEH9 535 aa14.53□□□□□ -0.08
SCAF11-201ENST00000266589 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-201ENST00000266589 GLI3P10071 1580 aa14.53□□□□□ -0.08
SCAF11-201ENST00000266589 LAMB4A4D0S4 1761 aa14.53□□□□□ -0.08
SCAF11-201ENST00000266589 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
SCAF11-201ENST00000266589 PROSER3Q2NL68 480 aa14.52□□□□□ -0.09
SCAF11-201ENST00000266589 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
SCAF11-201ENST00000266589 NWD2Q9ULI1 1742 aa14.52□□□□□ -0.09
SCAF11-201ENST00000266589 GCC1Q96CN9 775 aa14.51□□□□□ -0.09
SCAF11-201ENST00000266589 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
SCAF11-201ENST00000266589 ANKRD44Q8N8A2 993 aa14.51□□□□□ -0.09
SCAF11-201ENST00000266589 PI4KAP2A4QPH2 592 aa14.5□□□□□ -0.09
SCAF11-201ENST00000266589 SNRPA1P09661 255 aaKnown RBP14.5□□□□□ -0.09
SCAF11-201ENST00000266589 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
SCAF11-201ENST00000266589 RPAP2Q8IXW5 612 aaPredicted RBP14.5□□□□□ -0.09
SCAF11-201ENST00000266589 PI4KAP1Q8N8J0 262 aa14.5□□□□□ -0.09
SCAF11-201ENST00000266589 DNAAF4Q8WXU2 420 aa14.5□□□□□ -0.09
SCAF11-201ENST00000266589 DDX21Q9NR30 783 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCAF11-201ENST00000266589 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms