RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 KDM6AO15550 1401 aaPredicted RBP26.39■■□□□ 1.82
CASP6-201ENST00000265164 PLEKHO1Q53GL0 409 aaPredicted RBP26.39■■□□□ 1.81
CASP6-201ENST00000265164 UBR3Q6ZT12 1888 aa26.39■■□□□ 1.81
CASP6-201ENST00000265164 ZNF530Q6P9A1 599 aaPredicted RBP26.38■■□□□ 1.81
CASP6-201ENST00000265164 LOC102724428A0A0B4J2F2 783 aa26.36■■□□□ 1.81
CASP6-201ENST00000265164 MSH5O43196 834 aa26.36■■□□□ 1.81
CASP6-201ENST00000265164 SIK1P57059 783 aa26.36■■□□□ 1.81
CASP6-201ENST00000265164 AMOTQ4VCS5 1084 aa26.36■■□□□ 1.81
CASP6-201ENST00000265164 AMIGO3Q86WK7 504 aa26.36■■□□□ 1.81
CASP6-201ENST00000265164 ATG3Q9NT62 314 aa26.35■■□□□ 1.81
CASP6-201ENST00000265164 WDR43Q15061 677 aaKnown RBP eCLIP26.34■■□□□ 1.81
CASP6-201ENST00000265164 DCAF5Q96JK2 942 aa26.34■■□□□ 1.81
CASP6-201ENST00000265164 SMIM5Q71RC9 77 aa26.34■■□□□ 1.81
CASP6-201ENST00000265164 LINC00116Q8NCU8 138 aa26.34■■□□□ 1.81
CASP6-201ENST00000265164 SCN11AQ9UI33 1791 aa26.33■■□□□ 1.81
CASP6-201ENST00000265164 ERVV-2B6SEH9 535 aa26.33■■□□□ 1.81
CASP6-201ENST00000265164 HSP90AB1P08238 724 aaKnown RBP26.33■■□□□ 1.81
CASP6-201ENST00000265164 ITPK1Q13572 414 aa26.33■■□□□ 1.81
CASP6-201ENST00000265164 VIRMAQ69YN4 1812 aaKnown RBP26.33■■□□□ 1.8
CASP6-201ENST00000265164 POLD1P28340 1107 aa26.32■■□□□ 1.8
CASP6-201ENST00000265164 COL3A1P02461 1466 aaPredicted RBP26.31■■□□□ 1.8
CASP6-201ENST00000265164 MAP3K5Q99683 1374 aa26.31■■□□□ 1.8
CASP6-201ENST00000265164 HMOX1P09601 288 aa26.31■■□□□ 1.8
CASP6-201ENST00000265164 MSL1Q68DK7 614 aa26.31■■□□□ 1.8
CASP6-201ENST00000265164 AK7Q96M32 723 aa26.31■■□□□ 1.8
CASP6-201ENST00000265164 ZNF831Q5JPB2 1677 aa26.3■■□□□ 1.8
CASP6-201ENST00000265164 ATP6V1AP38606 617 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 C1orf141Q5JVX7 400 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 DCAF8L1A6NGE4 600 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 DIAPH1O60610 1272 aaKnown RBP26.29■■□□□ 1.8
CASP6-201ENST00000265164 KLHL34Q8N239 644 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 SLC4A9Q96Q91 983 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 ADAMTS8Q9UP79 889 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 NUDCQ9Y266 331 aa26.29■■□□□ 1.8
CASP6-201ENST00000265164 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
CASP6-201ENST00000265164 PHF14O94880 888 aa26.28■■□□□ 1.8
CASP6-201ENST00000265164 HMGB2P26583 209 aaKnown RBP26.27■■□□□ 1.8
CASP6-201ENST00000265164 CABP4P57796 275 aa26.27■■□□□ 1.8
CASP6-201ENST00000265164 FLAD1Q8NFF5 587 aa26.26■■□□□ 1.79
CASP6-201ENST00000265164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.25■■□□□ 1.79
CASP6-201ENST00000265164 RBM42Q9BTD8 480 aaKnown RBP26.24■■□□□ 1.79
CASP6-201ENST00000265164 YY1P25490 414 aa26.24■■□□□ 1.79
CASP6-201ENST00000265164 NFATC2IPQ8NCF5 419 aa26.24■■□□□ 1.79
CASP6-201ENST00000265164 HNRNPUQ00839 825 aaKnown RBP eCLIP26.23■■□□□ 1.79
CASP6-201ENST00000265164 AKAP4Q5JQC9 854 aa26.23■■□□□ 1.79
CASP6-201ENST00000265164 NLGN2Q8NFZ4 835 aa26.23■■□□□ 1.79
CASP6-201ENST00000265164 GNPATO15228 680 aa26.22■■□□□ 1.79
CASP6-201ENST00000265164 SSFA2P28290 1259 aa26.22■■□□□ 1.79
CASP6-201ENST00000265164 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.79
CASP6-201ENST00000265164 U2SURPO15042 1029 aaKnown RBP26.2■■□□□ 1.79
CASP6-201ENST00000265164 U2AF1L5P0DN76 240 aaPredicted RBP26.2■■□□□ 1.79
CASP6-201ENST00000265164 U2AF1Q01081 240 aaKnown RBP eCLIP26.2■■□□□ 1.79
CASP6-201ENST00000265164 MTHFSDQ2M296 383 aaKnown RBP26.2■■□□□ 1.79
CASP6-201ENST00000265164 LGR6Q9HBX8 967 aa26.2■■□□□ 1.79
CASP6-201ENST00000265164 TJP1Q07157 1748 aa26.2■■□□□ 1.78
CASP6-201ENST00000265164 ADAMTS7Q9UKP4 1686 aa26.2■■□□□ 1.78
CASP6-201ENST00000265164 MRC1P22897 1456 aa26.18■■□□□ 1.78
CASP6-201ENST00000265164 PTCD1O75127 700 aaKnown RBP26.18■■□□□ 1.78
CASP6-201ENST00000265164 CHD4Q14839 1912 aa26.17■■□□□ 1.78
CASP6-201ENST00000265164 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
CASP6-201ENST00000265164 RNMTO43148 476 aaKnown RBP26.15■■□□□ 1.78
CASP6-201ENST00000265164 C4AP0C0L4 1744 aa26.15■■□□□ 1.78
CASP6-201ENST00000265164 SLC52A2Q9HAB3 445 aa26.15■■□□□ 1.78
CASP6-201ENST00000265164 CNTNAP4Q9C0A0 1308 aa26.13■■□□□ 1.77
CASP6-201ENST00000265164 GPR162Q16538 588 aa26.13■■□□□ 1.77
CASP6-201ENST00000265164 RTCBQ9Y3I0 505 aaKnown RBP26.13■■□□□ 1.77
CASP6-201ENST00000265164 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
CASP6-201ENST00000265164 RC3H1Q5TC82 1133 aaKnown RBP26.11■■□□□ 1.77
CASP6-201ENST00000265164 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
CASP6-201ENST00000265164 PNNQ9H307 717 aaKnown RBP26.11■■□□□ 1.77
CASP6-201ENST00000265164 FCHSD2O94868 740 aa26.1■■□□□ 1.77
CASP6-201ENST00000265164 SLC39A6Q13433 755 aa26.1■■□□□ 1.77
CASP6-201ENST00000265164 RUNDC1Q96C34 613 aa26.1■■□□□ 1.77
CASP6-201ENST00000265164 KCPQ6ZWJ8 1503 aa26.1■■□□□ 1.77
CASP6-201ENST00000265164 TRAPPC3LQ5T215 181 aa26.09■■□□□ 1.77
CASP6-201ENST00000265164 ARHGEF1Q92888 912 aaKnown RBP26.09■■□□□ 1.77
CASP6-201ENST00000265164 UBR2Q8IWV8 1755 aa26.09■■□□□ 1.77
CASP6-201ENST00000265164 CENPBP07199 599 aaPredicted RBP26.09■■□□□ 1.77
CASP6-201ENST00000265164 SIPA1L3O60292 1781 aaPredicted RBP26.08■■□□□ 1.77
CASP6-201ENST00000265164 RPS6KA4O75676 772 aa26.08■■□□□ 1.77
CASP6-201ENST00000265164 CRKLP46109 303 aaKnown RBP26.08■■□□□ 1.77
CASP6-201ENST00000265164 CD2APQ9Y5K6 639 aa26.08■■□□□ 1.77
CASP6-201ENST00000265164 ZBED9Q6R2W3 1325 aa26.07■■□□□ 1.76
CASP6-201ENST00000265164 YBX3P16989 372 aaKnown RBP eCLIP26.06■■□□□ 1.76
CASP6-201ENST00000265164 PHACTR3Q96KR7 559 aa26.06■■□□□ 1.76
CASP6-201ENST00000265164 RSPH6AQ9H0K4 717 aa26.06■■□□□ 1.76
CASP6-201ENST00000265164 SENP3-EIF4A1A0A087X0R7 540 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 APAF1O14727 1248 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 ADRA2BP18089 450 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 PRKAR2BP31323 418 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 DNAJC10Q8IXB1 793 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 GAS2L2Q8NHY3 880 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 PLEKHF1Q96S99 279 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 MMP10P09238 476 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 IL17REQ8NFR9 667 aa26.04■■□□□ 1.76
CASP6-201ENST00000265164 KIF13BQ9NQT8 1826 aa26.03■■□□□ 1.76
CASP6-201ENST00000265164 GNAT3A8MTJ3 354 aa26.03■■□□□ 1.76
CASP6-201ENST00000265164 GYS1P13807 737 aa26.03■■□□□ 1.76
CASP6-201ENST00000265164 RFC4P35249 363 aa26.03■■□□□ 1.76
CASP6-201ENST00000265164 INTS5Q6P9B9 1019 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms