RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 CCDC196A0A1B0GTZ2 297 aa20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 ANO10Q9NW15 660 aa20.36■□□□□ 0.85
NOTCH3-201ENST00000263388 VPS36Q86VN1 386 aa20.36■□□□□ 0.85
NOTCH3-201ENST00000263388 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
NOTCH3-201ENST00000263388 STAMBPO95630 424 aa20.36■□□□□ 0.85
NOTCH3-201ENST00000263388 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 LRP2BPQ9P2M1 347 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 SHTN1A0MZ66 631 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 FEZ1Q99689 392 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 GLRX3O76003 335 aaKnown RBP20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 FAM107BQ9H098 131 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 AKAP2Q9Y2D5 859 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 CABP1Q9NZU7 370 aa20.35■□□□□ 0.85
NOTCH3-201ENST00000263388 NF2P35240 595 aa20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 ZNF76P36508 570 aa20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 PPM1EQ8WY54 764 aa20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 SSBP05455 408 aaKnown RBP eCLIP20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 AIDAQ96BJ3 306 aa20.34■□□□□ 0.85
NOTCH3-201ENST00000263388 TOM1L2Q6ZVM7 507 aa20.33■□□□□ 0.85
NOTCH3-201ENST00000263388 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
NOTCH3-201ENST00000263388 NFE2L2Q16236 605 aa20.33■□□□□ 0.84
NOTCH3-201ENST00000263388 FKBP15Q5T1M5 1219 aa20.33■□□□□ 0.84
NOTCH3-201ENST00000263388 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.84
NOTCH3-201ENST00000263388 GOLGA6L10A0A0M3HER8 536 aa20.33■□□□□ 0.84
NOTCH3-201ENST00000263388 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 SPATA24Q86W54 205 aa20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 MAP2K1Q02750 393 aaPredicted RBP20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 TMEM57Q8N5G2 664 aa20.32■□□□□ 0.84
NOTCH3-201ENST00000263388 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 TNIP1Q15025 636 aa20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 RAB34Q9BZG1 259 aa20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 TSG101Q99816 390 aa20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 MPNDQ8N594 471 aa20.31■□□□□ 0.84
NOTCH3-201ENST00000263388 CGNQ9P2M7 1197 aaKnown RBP20.3■□□□□ 0.84
NOTCH3-201ENST00000263388 NEMFO60524 1076 aa20.3■□□□□ 0.84
NOTCH3-201ENST00000263388 CAMK4Q16566 473 aa20.3■□□□□ 0.84
NOTCH3-201ENST00000263388 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
NOTCH3-201ENST00000263388 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
NOTCH3-201ENST00000263388 MX1P20591 662 aa20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 CEP63Q96MT8 703 aa20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 STARD3NLO95772 234 aa20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 GSDMDP57764 484 aa20.29■□□□□ 0.84
NOTCH3-201ENST00000263388 SSR1P43307 286 aaKnown RBP20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 C8orf76Q96K31 380 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 NESP48681 1621 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 NEBLO76041 1014 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 MICALCLQ6ZW33 695 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 CACNA2D4Q7Z3S7 1137 aa20.28■□□□□ 0.84
NOTCH3-201ENST00000263388 GCOM1H8Y6P7 765 aaPredicted RBP20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 MYZAPP0CAP1 466 aa20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 IDH1O75874 414 aaKnown RBP20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 RAI14Q9P0K7 980 aa20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
NOTCH3-201ENST00000263388 ANAPC15P60006 121 aa20.27■□□□□ 0.83
NOTCH3-201ENST00000263388 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.83
NOTCH3-201ENST00000263388 CLIP2Q9UDT6 1046 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 CAVIN2O95810 425 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 POTEB2H3BUK9 544 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 TAOK3Q9H2K8 898 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 LUZP1Q86V48 1076 aa20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 USO1O60763 962 aaKnown RBP20.26■□□□□ 0.83
NOTCH3-201ENST00000263388 GOLGA6L9A6NEM1 432 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 ZSCAN29Q8IWY8 852 aaPredicted RBP20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 CCDC150Q8NCX0 1101 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 CALCOCO1Q9P1Z2 691 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 IL1RAPL2Q9NP60 686 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 NAPBQ9H115 298 aa20.25■□□□□ 0.83
NOTCH3-201ENST00000263388 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 MCM5P33992 734 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 IFFO1Q0D2I5 559 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms