RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZSCAN23Q3MJ62 389 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 ZNF530Q6P9A1 599 aaPredicted RBP14.11□□□□□ -0.15
SMG6-201ENST00000263073 TMC6Q7Z403 805 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 CCDC148Q8NFR7 591 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 GOLGA6L7A0A1B0GV03 622 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 SLC3A2P08195 630 aaKnown RBP14.11□□□□□ -0.15
SMG6-201ENST00000263073 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 LIG1P18858 919 aa14.11□□□□□ -0.15
SMG6-201ENST00000263073 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 CCDC8Q9H0W5 538 aaPredicted RBP14.1□□□□□ -0.15
SMG6-201ENST00000263073 BTBD11A6QL63 1104 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 TOP1P11387 765 aaKnown RBP14.1□□□□□ -0.15
SMG6-201ENST00000263073 GIMAP6Q6P9H5 292 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 GOPCQ9HD26 462 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMG6-201ENST00000263073 V9GYY5 206 aaPredicted RBP14.1□□□□□ -0.15
SMG6-201ENST00000263073 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
SMG6-201ENST00000263073 BAG4O95429 457 aaKnown RBP14.09□□□□□ -0.15
SMG6-201ENST00000263073 USP5P45974 858 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 CCDC57Q2TAC2 916 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 HSP90AA4PQ58FG1 418 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 TBC1D9Q6ZT07 1266 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 GOLGA6L10A0A0M3HER8 536 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 CABP4P57796 275 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
SMG6-201ENST00000263073 NOL7Q9UMY1 257 aaKnown RBP14.09□□□□□ -0.15
SMG6-201ENST00000263073 NSD3Q9BZ95 1437 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 LMAN1P49257 510 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 CCDC144CPQ8IYA2 1237 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 GJB2P29033 226 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 UBE2Q2Q8WVN8 375 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 UBAC1Q9BSL1 405 aa14.09□□□□□ -0.15
SMG6-201ENST00000263073 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.15
SMG6-201ENST00000263073 HCLS1P14317 486 aaPredicted RBP14.08□□□□□ -0.15
SMG6-201ENST00000263073 NACAP1Q9BZK3 213 aa14.08□□□□□ -0.15
SMG6-201ENST00000263073 KIF5CO60282 957 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 ATF3P18847 181 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 JAKMIP3Q5VZ66 844 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 TAF4BQ92750 862 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 DYDC1Q8WWB3 177 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.16
SMG6-201ENST00000263073 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
SMG6-201ENST00000263073 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
SMG6-201ENST00000263073 RAB11FIP3O75154 756 aa14.07□□□□□ -0.16
SMG6-201ENST00000263073 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
SMG6-201ENST00000263073 RPAP2Q8IXW5 612 aaPredicted RBP14.07□□□□□ -0.16
SMG6-201ENST00000263073 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
SMG6-201ENST00000263073 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
SMG6-201ENST00000263073 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.162e-14■■■■■ 50.7
SMG6-201ENST00000263073 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 USP8P40818 1118 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 MAP2K1Q02750 393 aaPredicted RBP14.06□□□□□ -0.16
SMG6-201ENST00000263073 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 ATP2C2O75185 946 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 FSIP1Q8NA03 581 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 CEP135Q66GS9 1140 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 CDKL5O76039 1030 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 TRIM27P14373 513 aa14.06□□□□□ -0.16
SMG6-201ENST00000263073 NFE2L2Q16236 605 aa14.05□□□□□ -0.16
SMG6-201ENST00000263073 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
SMG6-201ENST00000263073 POLR3DP05423 398 aaPredicted RBP14.05□□□□□ -0.16
SMG6-201ENST00000263073 BICDL1Q6ZP65 573 aa14.05□□□□□ -0.16
SMG6-201ENST00000263073 MPHOSPH8Q99549 860 aa14.05□□□□□ -0.16
SMG6-201ENST00000263073 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
SMG6-201ENST00000263073 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
SMG6-201ENST00000263073 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
SMG6-201ENST00000263073 SPA17Q15506 151 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 LRP2BPQ9P2M1 347 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
SMG6-201ENST00000263073 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 CALCOCO1Q9P1Z2 691 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 RBM5P52756 815 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMG6-201ENST00000263073 C8orf76Q96K31 380 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 CNPY2Q9Y2B0 182 aa14.04□□□□□ -0.16
SMG6-201ENST00000263073 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SMG6-201ENST00000263073 SLC4A8Q2Y0W8 1093 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 AIDAQ96BJ3 306 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 KRT32Q14532 448 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMG6-201ENST00000263073 ZRSR2Q15696 482 aaKnown RBP14.03□□□□□ -0.16
SMG6-201ENST00000263073 UBA5Q9GZZ9 404 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 GNL3LQ9NVN8 582 aaKnown RBP14.03□□□□□ -0.16
SMG6-201ENST00000263073 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 STX6O43752 255 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
SMG6-201ENST00000263073 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
SMG6-201ENST00000263073 GBP2P32456 591 aaPredicted RBP14.02□□□□□ -0.16
SMG6-201ENST00000263073 IFFO1Q0D2I5 559 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms