RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 KIF7Q2M1P5 1343 aa31.4■■■□□ 2.62
HMG20B-201ENST00000262949 CHD4Q14839 1912 aa31.39■■■□□ 2.62
HMG20B-201ENST00000262949 GNPATO15228 680 aa31.38■■■□□ 2.61
HMG20B-201ENST00000262949 CABP4P57796 275 aa31.38■■■□□ 2.61
HMG20B-201ENST00000262949 SULT6B1Q6IMI4 303 aa31.38■■■□□ 2.61
HMG20B-201ENST00000262949 MTHFSP49914 203 aa31.37■■■□□ 2.61
HMG20B-201ENST00000262949 ITPK1Q13572 414 aa31.37■■■□□ 2.61
HMG20B-201ENST00000262949 AMER1Q5JTC6 1135 aaPredicted RBP31.37■■■□□ 2.61
HMG20B-201ENST00000262949 CD2APQ9Y5K6 639 aa31.37■■■□□ 2.61
HMG20B-201ENST00000262949 GRIN3BO60391 1043 aa31.36■■■□□ 2.61
HMG20B-201ENST00000262949 AEBP1Q8IUX7 1158 aa31.36■■■□□ 2.61
HMG20B-201ENST00000262949 RBM42Q9BTD8 480 aaKnown RBP31.36■■■□□ 2.61
HMG20B-201ENST00000262949 AMIGO3Q86WK7 504 aa31.35■■■□□ 2.61
HMG20B-201ENST00000262949 IL13P35225 146 aa31.34■■■□□ 2.61
HMG20B-201ENST00000262949 SMIM5Q71RC9 77 aa31.33■■■□□ 2.61
HMG20B-201ENST00000262949 UBR3Q6ZT12 1888 aa31.32■■■□□ 2.6
HMG20B-201ENST00000262949 RTCBQ9Y3I0 505 aaKnown RBP31.31■■■□□ 2.6
HMG20B-201ENST00000262949 KDM6AO15550 1401 aaPredicted RBP31.28■■■□□ 2.6
HMG20B-201ENST00000262949 TRAPPC3LQ5T215 181 aa31.28■■■□□ 2.6
HMG20B-201ENST00000262949 KDRP35968 1356 aa31.28■■■□□ 2.6
HMG20B-201ENST00000262949 YBX3P16989 372 aaKnown RBP eCLIP31.27■■■□□ 2.6
HMG20B-201ENST00000262949 CC2D1BQ5T0F9 858 aaKnown RBP31.27■■■□□ 2.6
HMG20B-201ENST00000262949 RC3H1Q5TC82 1133 aaKnown RBP31.26■■■□□ 2.59
HMG20B-201ENST00000262949 NFATC2IPQ8NCF5 419 aa31.26■■■□□ 2.59
HMG20B-201ENST00000262949 PER1O15534 1290 aaPredicted RBP31.24■■■□□ 2.59
HMG20B-201ENST00000262949 SLC4A9Q96Q91 983 aa31.24■■■□□ 2.59
HMG20B-201ENST00000262949 GOLGB1Q14789 3259 aaKnown RBP31.24■■■□□ 2.59
HMG20B-201ENST00000262949 PTCD1O75127 700 aaKnown RBP31.23■■■□□ 2.59
HMG20B-201ENST00000262949 ADRA2BP18089 450 aa31.23■■■□□ 2.59
HMG20B-201ENST00000262949 AKAP4Q5JQC9 854 aa31.23■■■□□ 2.59
HMG20B-201ENST00000262949 CNTNAP4Q9C0A0 1308 aa31.22■■■□□ 2.59
HMG20B-201ENST00000262949 DIAPH1O60610 1272 aaKnown RBP31.21■■■□□ 2.59
HMG20B-201ENST00000262949 NLGN1Q8N2Q7 840 aa31.21■■■□□ 2.59
HMG20B-201ENST00000262949 HMOX1P09601 288 aa31.2■■■□□ 2.59
HMG20B-201ENST00000262949 RFC4P35249 363 aa31.2■■■□□ 2.59
HMG20B-201ENST00000262949 RPS6KA4O75676 772 aa31.19■■■□□ 2.58
HMG20B-201ENST00000262949 MMP10P09238 476 aa31.19■■■□□ 2.58
HMG20B-201ENST00000262949 ZNF831Q5JPB2 1677 aa31.19■■■□□ 2.58
HMG20B-201ENST00000262949 CNGB1Q14028 1251 aaPredicted RBP31.17■■■□□ 2.58
HMG20B-201ENST00000262949 ARHGEF1Q92888 912 aaKnown RBP31.17■■■□□ 2.58
HMG20B-201ENST00000262949 SLC52A2Q9HAB3 445 aa31.14■■■□□ 2.58
HMG20B-201ENST00000262949 NPC1L1Q9UHC9 1359 aa31.14■■■□□ 2.58
HMG20B-201ENST00000262949 CRKLP46109 303 aaKnown RBP31.13■■■□□ 2.57
HMG20B-201ENST00000262949 RNMTO43148 476 aaKnown RBP31.11■■■□□ 2.57
HMG20B-201ENST00000262949 GIGYF1O75420 1035 aaPredicted RBP31.11■■■□□ 2.57
HMG20B-201ENST00000262949 LGR6Q9HBX8 967 aa31.11■■■□□ 2.57
HMG20B-201ENST00000262949 WWC3Q9ULE0 1092 aa31.11■■■□□ 2.57
HMG20B-201ENST00000262949 COL5A3P25940 1745 aaPredicted RBP31.1■■■□□ 2.57
HMG20B-201ENST00000262949 GYS1P13807 737 aa31.1■■■□□ 2.57
HMG20B-201ENST00000262949 CCDC87Q9NVE4 849 aa31.1■■■□□ 2.57
HMG20B-201ENST00000262949 PARP3Q9Y6F1 533 aa31.1■■■□□ 2.57
HMG20B-201ENST00000262949 C1QTNF8P60827 252 aa31.09■■■□□ 2.57
HMG20B-201ENST00000262949 MTHFSDQ2M296 383 aaKnown RBP31.09■■■□□ 2.57
HMG20B-201ENST00000262949 SCN11AQ9UI33 1791 aa31.09■■■□□ 2.57
HMG20B-201ENST00000262949 U2SURPO15042 1029 aaKnown RBP31.08■■■□□ 2.57
HMG20B-201ENST00000262949 TGFB2P61812 414 aa31.07■■■□□ 2.56
HMG20B-201ENST00000262949 MYH14Q7Z406 1995 aaKnown RBP31.03■■■□□ 2.56
HMG20B-201ENST00000262949 CICQ96RK0 1608 aaPredicted RBP31.03■■■□□ 2.56
HMG20B-201ENST00000262949 SLC39A6Q13433 755 aa31.03■■■□□ 2.56
HMG20B-201ENST00000262949 DNAJC10Q8IXB1 793 aa31.03■■■□□ 2.56
HMG20B-201ENST00000262949 CFAP53Q96M91 514 aa31.03■■■□□ 2.56
HMG20B-201ENST00000262949 INTS5Q6P9B9 1019 aaKnown RBP31.01■■■□□ 2.55
HMG20B-201ENST00000262949 GAS2L2Q8NHY3 880 aa31.01■■■□□ 2.55
HMG20B-201ENST00000262949 USP42Q9H9J4 1324 aaKnown RBP31■■■□□ 2.55
HMG20B-201ENST00000262949 ZPR1O75312 459 aa31■■■□□ 2.55
HMG20B-201ENST00000262949 SRP68Q9UHB9 627 aaKnown RBP31■■■□□ 2.55
HMG20B-201ENST00000262949 ATP10DQ9P241 1426 aa30.99■■■□□ 2.55
HMG20B-201ENST00000262949 SENP3-EIF4A1A0A087X0R7 540 aa30.99■■■□□ 2.55
HMG20B-201ENST00000262949 A0A0G2JLW4 131 aa30.99■■■□□ 2.55
HMG20B-201ENST00000262949 TTC5Q8N0Z6 440 aa30.99■■■□□ 2.55
HMG20B-201ENST00000262949 MRC1P22897 1456 aa30.99■■■□□ 2.55
HMG20B-201ENST00000262949 C10orf71Q711Q0 1435 aa30.98■■■□□ 2.55
HMG20B-201ENST00000262949 PXDNLA1KZ92 1463 aa30.98■■■□□ 2.55
HMG20B-201ENST00000262949 GPBP1L1Q9HC44 474 aaPredicted RBP30.98■■■□□ 2.55
HMG20B-201ENST00000262949 BCS1LQ9Y276 419 aa30.98■■■□□ 2.55
HMG20B-201ENST00000262949 TJP1Q07157 1748 aa30.98■■■□□ 2.55
HMG20B-201ENST00000262949 TEFQ10587 303 aa30.97■■■□□ 2.55
HMG20B-201ENST00000262949 FKBP8Q14318 412 aa30.97■■■□□ 2.55
HMG20B-201ENST00000262949 VSIG10Q8N0Z9 540 aa30.97■■■□□ 2.55
HMG20B-201ENST00000262949 C4AP0C0L4 1744 aa30.97■■■□□ 2.55
HMG20B-201ENST00000262949 COL3A1P02461 1466 aaPredicted RBP30.96■■■□□ 2.55
HMG20B-201ENST00000262949 GNAT3A8MTJ3 354 aa30.96■■■□□ 2.55
HMG20B-201ENST00000262949 CYP19A1P11511 503 aaPredicted RBP30.96■■■□□ 2.55
HMG20B-201ENST00000262949 NUDCQ9Y266 331 aa30.95■■■□□ 2.55
HMG20B-201ENST00000262949 KIF13BQ9NQT8 1826 aa30.94■■■□□ 2.54
HMG20B-201ENST00000262949 DPEP1P16444 411 aa30.94■■■□□ 2.54
HMG20B-201ENST00000262949 SOS1Q07889 1333 aaPredicted RBP30.93■■■□□ 2.54
HMG20B-201ENST00000262949 USPL1Q5W0Q7 1092 aa30.92■■■□□ 2.54
HMG20B-201ENST00000262949 FCHSD2O94868 740 aa30.91■■■□□ 2.54
HMG20B-201ENST00000262949 STARD3NLO95772 234 aa30.91■■■□□ 2.54
HMG20B-201ENST00000262949 ZNF526Q8TF50 670 aaPredicted RBP30.91■■■□□ 2.54
HMG20B-201ENST00000262949 ADCY9O60503 1353 aa30.91■■■□□ 2.54
HMG20B-201ENST00000262949 KCPQ6ZWJ8 1503 aa30.9■■■□□ 2.54
HMG20B-201ENST00000262949 VIRMAQ69YN4 1812 aaKnown RBP30.9■■■□□ 2.54
HMG20B-201ENST00000262949 ADAMTS7Q9UKP4 1686 aa30.9■■■□□ 2.54
HMG20B-201ENST00000262949 N4BP2Q86UW6 1770 aaPredicted RBP30.89■■■□□ 2.54
HMG20B-201ENST00000262949 DDR1Q08345 913 aa30.89■■■□□ 2.54
HMG20B-201ENST00000262949 ARHGAP27Q6ZUM4 889 aa30.89■■■□□ 2.54
HMG20B-201ENST00000262949 PIM2Q9P1W9 311 aa30.89■■■□□ 2.54
HMG20B-201ENST00000262949 NARFQ9UHQ1 456 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms