RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
TTC39A-201ENST00000262675 CYP27B1O15528 508 aa12.71□□□□□ -0.37
TTC39A-201ENST00000262675 SSFA2P28290 1259 aa12.71□□□□□ -0.37
TTC39A-201ENST00000262675 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
TTC39A-201ENST00000262675 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
TTC39A-201ENST00000262675 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
TTC39A-201ENST00000262675 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
TTC39A-201ENST00000262675 TMOD3Q9NYL9 352 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
TTC39A-201ENST00000262675 PIGBQ92521 554 aa12.68□□□□□ -0.38
TTC39A-201ENST00000262675 LOC102724428A0A0B4J2F2 783 aa12.67□□□□□ -0.38
TTC39A-201ENST00000262675 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
TTC39A-201ENST00000262675 SIK1P57059 783 aa12.67□□□□□ -0.38
TTC39A-201ENST00000262675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
TTC39A-201ENST00000262675 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-201ENST00000262675 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-201ENST00000262675 IRX6P78412 446 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-201ENST00000262675 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
TTC39A-201ENST00000262675 EYA1Q99502 592 aa12.66□□□□□ -0.38
TTC39A-201ENST00000262675 PHKG2P15735 406 aa12.65□□□□□ -0.38
TTC39A-201ENST00000262675 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-201ENST00000262675 ADCY9O60503 1353 aa12.65□□□□□ -0.38
TTC39A-201ENST00000262675 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
TTC39A-201ENST00000262675 ADRA2BP18089 450 aa12.64□□□□□ -0.39
TTC39A-201ENST00000262675 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
TTC39A-201ENST00000262675 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
TTC39A-201ENST00000262675 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
TTC39A-201ENST00000262675 CICQ96RK0 1608 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-201ENST00000262675 KIF13BQ9NQT8 1826 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 PHF14O94880 888 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 GNPATO15228 680 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 RC3H1Q5TC82 1133 aaKnown RBP12.63□□□□□ -0.39
TTC39A-201ENST00000262675 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
TTC39A-201ENST00000262675 TGFB2P61812 414 aa12.62□□□□□ -0.39
TTC39A-201ENST00000262675 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-201ENST00000262675 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
TTC39A-201ENST00000262675 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
TTC39A-201ENST00000262675 EIF4A2Q14240 407 aaKnown RBP12.61□□□□□ -0.39
TTC39A-201ENST00000262675 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
TTC39A-201ENST00000262675 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
TTC39A-201ENST00000262675 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
TTC39A-201ENST00000262675 KDRP35968 1356 aa12.61□□□□□ -0.39
TTC39A-201ENST00000262675 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
TTC39A-201ENST00000262675 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
TTC39A-201ENST00000262675 ITPK1Q13572 414 aa12.6□□□□□ -0.39
TTC39A-201ENST00000262675 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
TTC39A-201ENST00000262675 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
TTC39A-201ENST00000262675 MMP10P09238 476 aa12.59□□□□□ -0.39
TTC39A-201ENST00000262675 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
TTC39A-201ENST00000262675 HSPA6P17066 643 aa12.58□□□□□ -0.4
TTC39A-201ENST00000262675 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
TTC39A-201ENST00000262675 PANK3Q9H999 370 aa12.58□□□□□ -0.4
TTC39A-201ENST00000262675 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 CABP4P57796 275 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 C10orf71Q711Q0 1435 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
TTC39A-201ENST00000262675 RFC4P35249 363 aa12.56□□□□□ -0.4
TTC39A-201ENST00000262675 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
TTC39A-201ENST00000262675 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
TTC39A-201ENST00000262675 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
TTC39A-201ENST00000262675 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
TTC39A-201ENST00000262675 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
TTC39A-201ENST00000262675 TNNT2P45379 298 aaPredicted RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 MTHFSP49914 203 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
TTC39A-201ENST00000262675 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
TTC39A-201ENST00000262675 GYS1P13807 737 aa12.53□□□□□ -0.4
TTC39A-201ENST00000262675 UTRNP46939 3433 aa12.53□□□□□ -0.4
TTC39A-201ENST00000262675 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
TTC39A-201ENST00000262675 APLP1P51693 650 aa12.52□□□□□ -0.4
TTC39A-201ENST00000262675 SMIM5Q71RC9 77 aa12.52□□□□□ -0.4
TTC39A-201ENST00000262675 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.4
TTC39A-201ENST00000262675 BCS1LQ9Y276 419 aa12.52□□□□□ -0.4
TTC39A-201ENST00000262675 KIF3CO14782 793 aa12.52□□□□□ -0.41
TTC39A-201ENST00000262675 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
TTC39A-201ENST00000262675 TOMM70O94826 608 aa12.51□□□□□ -0.41
TTC39A-201ENST00000262675 CC2D1BQ5T0F9 858 aaKnown RBP12.51□□□□□ -0.41
TTC39A-201ENST00000262675 PIM2Q9P1W9 311 aa12.51□□□□□ -0.41
TTC39A-201ENST00000262675 MYH14Q7Z406 1995 aaKnown RBP12.51□□□□□ -0.41
TTC39A-201ENST00000262675 FCHSD2O94868 740 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
TTC39A-201ENST00000262675 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms