RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
CALCOCO1-201ENST00000262059 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
CALCOCO1-201ENST00000262059 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
CALCOCO1-201ENST00000262059 HCLS1P14317 486 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 ARFGAP3Q9NP61 516 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 VPS18Q9P253 973 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 ZNF397Q8NF99 534 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 PPP6R1Q9UPN7 881 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
CALCOCO1-201ENST00000262059 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.45e-10■■■□□ 16.8
CALCOCO1-201ENST00000262059 STIM1Q13586 685 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 MSL1Q68DK7 614 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 ERICH3Q5RHP9 1530 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 GNG11P61952 73 aa12.53□□□□□ -0.4
CALCOCO1-201ENST00000262059 GNAI2P04899 355 aa12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 IKQ13123 557 aaPredicted RBP12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 UVSSAQ2YD98 709 aa12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 SPECC1Q5M775 1068 aa12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.4
CALCOCO1-201ENST00000262059 MTHFSP49914 203 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 GSDMDP57764 484 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 FEZ1Q99689 392 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 KIF6Q6ZMV9 814 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
CALCOCO1-201ENST00000262059 CASTP20810 708 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC160A6NGH7 325 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 HLTFQ14527 1009 aaKnown RBP eCLIP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 SPA17Q15506 151 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 TTC39AQ5SRH9 613 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
CALCOCO1-201ENST00000262059 PHACTR2O75167 634 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 SPATA24Q86W54 205 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 ATRIPQ8WXE1 791 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 SLU7O95391 586 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 MATR3P43243 847 aaKnown RBP eCLIP12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 KLHL10Q6JEL2 608 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 EBAG9O00559 213 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 WWC2Q6AWC2 1192 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 NLRP6P59044 892 aa12.5□□□□□ -0.41
CALCOCO1-201ENST00000262059 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 HSF2BPO75031 334 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 PAFAH1B1P43034 410 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC6Q16204 474 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 GCOM1H8Y6P7 765 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 SKILP12757 684 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
CALCOCO1-201ENST00000262059 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 ZNF165P49910 485 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 BIN1O00499 593 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
CALCOCO1-201ENST00000262059 CCDC121Q6ZUS5 278 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms