RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 HSF2BPO75031 334 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 MSL1Q68DK7 614 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.32□□□□□ -1.087e-7■■■■■ 27.7
HERC2-201ENST00000261609 RUSC2Q8N2Y8 1516 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 TMCO5BA8MYB1 307 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 RSRC1Q96IZ7 334 aaKnown RBP8.32□□□□□ -1.08
HERC2-201ENST00000261609 BLOC1S2Q6QNY1 142 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 LRRC9Q6ZRR7 1453 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
HERC2-201ENST00000261609 UBE2HP62256 183 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 TMC6Q7Z403 805 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 PRDM2Q13029 1718 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 UBE4AQ14139 1066 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 CAVIN2O95810 425 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 STX1AQ16623 288 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 MPHOSPH10O00566 681 aaKnown RBP8.32□□□□□ -1.08
HERC2-201ENST00000261609 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
HERC2-201ENST00000261609 SPECC1LQ69YQ0 1117 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 VPS18Q9P253 973 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 CTNNA3Q9UI47 895 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 AIMP1Q12904 312 aaKnown RBP8.31□□□□□ -1.08
HERC2-201ENST00000261609 HOMEZQ8IX15 550 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 ZNF165P49910 485 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 DAAM2Q86T65 1068 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 CABP2Q9NPB3 220 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 TUBB4AP04350 444 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 SETSIPP0DME0 302 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 FYB1O15117 783 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 PAFAH1B1P43034 410 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 WASF1Q92558 559 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
HERC2-201ENST00000261609 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 ANKRD50Q9ULJ7 1429 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 LIG1P18858 919 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.31□□□□□ -1.08
HERC2-201ENST00000261609 ANKS4BQ8N8V4 417 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 PRKAR2BP31323 418 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 CLNS1AP54105 237 aaKnown RBP8.31□□□□□ -1.08
HERC2-201ENST00000261609 ATRIPQ8WXE1 791 aa8.31□□□□□ -1.08
HERC2-201ENST00000261609 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 SMC1AQ14683 1233 aaKnown RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 HDXQ7Z353 690 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 MYRIPQ8NFW9 859 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 MAP2K2P36507 400 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 MYCBPQ99417 103 aaPredicted RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 CCDC69A6NI79 296 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 AACSQ86V21 672 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 USP48Q86UV5 1035 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 GABPB1Q06547 395 aaPredicted RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 CWC27Q6UX04 472 aaKnown RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 CCDC186Q7Z3E2 898 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 MAATS1Q7Z4T9 603 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 CCDC150Q8NCX0 1101 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 NEBLO76041 1014 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 MAP4K4O95819 1239 aaPredicted RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 SPECC1Q5M775 1068 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 CPLX3Q8WVH0 158 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 SLFN5Q08AF3 891 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 NUP133Q8WUM0 1156 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 FYCO1Q9BQS8 1478 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 DNAI1Q9UI46 699 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 U2AF2P26368 475 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■□□□ 12.2
HERC2-201ENST00000261609 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
HERC2-201ENST00000261609 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
HERC2-201ENST00000261609 CEP112Q8N8E3 955 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 OPA1O60313 960 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 EVA1CP58658 441 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 NACAP1Q9BZK3 213 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 SLU7O95391 586 aaKnown RBP8.29□□□□□ -1.08
HERC2-201ENST00000261609 TUBB4BP68371 445 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
HERC2-201ENST00000261609 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 ZBTB9Q96C00 473 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 MX1P20591 662 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 KIF5BP33176 963 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 GOPCQ9HD26 462 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 YEATS4O95619 227 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 BMP2KQ9NSY1 1161 aaPredicted RBP8.29□□□□□ -1.08
HERC2-201ENST00000261609 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
HERC2-201ENST00000261609 MYZAPP0CAP1 466 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 WDR66Q8TBY9 1149 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 GOLGA1Q92805 767 aa8.29□□□□□ -1.08
HERC2-201ENST00000261609 CTAGE15A4D2H0 777 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms