RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 TWISTNBQ3B726 338 aaPredicted RBP22.93■■□□□ 1.26
CCDC115-201ENST00000259229 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
CCDC115-201ENST00000259229 USP21Q9UK80 565 aa22.93■■□□□ 1.26
CCDC115-201ENST00000259229 NEFLP07196 543 aa22.92■■□□□ 1.26
CCDC115-201ENST00000259229 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
CCDC115-201ENST00000259229 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
CCDC115-201ENST00000259229 AFF2P51816 1311 aa22.91■■□□□ 1.26
CCDC115-201ENST00000259229 ATRNO75882 1429 aa22.91■■□□□ 1.26
CCDC115-201ENST00000259229 SSH1Q8WYL5 1049 aa22.91■■□□□ 1.26
CCDC115-201ENST00000259229 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
CCDC115-201ENST00000259229 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
CCDC115-201ENST00000259229 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
CCDC115-201ENST00000259229 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
CCDC115-201ENST00000259229 ITGB4P16144 1822 aa22.9■■□□□ 1.26
CCDC115-201ENST00000259229 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
CCDC115-201ENST00000259229 DOT1LQ8TEK3 1739 aa22.9■■□□□ 1.26
CCDC115-201ENST00000259229 KCNQ3O43525 872 aa22.9■■□□□ 1.26
CCDC115-201ENST00000259229 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
CCDC115-201ENST00000259229 CCDC9Q9Y3X0 531 aaKnown RBP22.89■■□□□ 1.25
CCDC115-201ENST00000259229 C5P01031 1676 aa22.88■■□□□ 1.25
CCDC115-201ENST00000259229 ALDH1L2Q3SY69 923 aa22.88■■□□□ 1.25
CCDC115-201ENST00000259229 HEG1Q9ULI3 1381 aa22.87■■□□□ 1.25
CCDC115-201ENST00000259229 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
CCDC115-201ENST00000259229 C20orf194Q5TEA3 1177 aa22.87■■□□□ 1.25
CCDC115-201ENST00000259229 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
CCDC115-201ENST00000259229 EXOC5O00471 708 aa22.86■■□□□ 1.25
CCDC115-201ENST00000259229 BRPF1P55201 1214 aaPredicted RBP22.86■■□□□ 1.25
CCDC115-201ENST00000259229 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
CCDC115-201ENST00000259229 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
CCDC115-201ENST00000259229 FAM98CQ17RN3 349 aaKnown RBP22.85■■□□□ 1.25
CCDC115-201ENST00000259229 DDB1Q16531 1140 aa22.84■■□□□ 1.25
CCDC115-201ENST00000259229 MRPL50Q8N5N7 158 aaKnown RBP22.83■■□□□ 1.25
CCDC115-201ENST00000259229 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
CCDC115-201ENST00000259229 KCPQ6ZWJ8 1503 aa22.83■■□□□ 1.25
CCDC115-201ENST00000259229 CABP4P57796 275 aa22.82■■□□□ 1.24
CCDC115-201ENST00000259229 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.82■■□□□ 1.24
CCDC115-201ENST00000259229 SLC39A6Q13433 755 aa22.82■■□□□ 1.24
CCDC115-201ENST00000259229 ZNF790Q6PG37 636 aa22.82■■□□□ 1.24
CCDC115-201ENST00000259229 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
CCDC115-201ENST00000259229 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
CCDC115-201ENST00000259229 MARCH10Q8NA82 808 aaPredicted RBP22.81■■□□□ 1.24
CCDC115-201ENST00000259229 GJD4Q96KN9 370 aaPredicted RBP22.81■■□□□ 1.24
CCDC115-201ENST00000259229 TNNQ9UQP3 1299 aa22.81■■□□□ 1.24
CCDC115-201ENST00000259229 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
CCDC115-201ENST00000259229 FRAT1Q92837 279 aaPredicted RBP22.79■■□□□ 1.24
CCDC115-201ENST00000259229 TRPC5Q9UL62 973 aaPredicted RBP22.79■■□□□ 1.24
CCDC115-201ENST00000259229 CACNA1FO60840 1977 aa22.79■■□□□ 1.24
CCDC115-201ENST00000259229 HOXB7P09629 217 aa22.79■■□□□ 1.24
CCDC115-201ENST00000259229 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
CCDC115-201ENST00000259229 BCL9O00512 1426 aa22.78■■□□□ 1.24
CCDC115-201ENST00000259229 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
CCDC115-201ENST00000259229 CRBNQ96SW2 442 aa22.77■■□□□ 1.24
CCDC115-201ENST00000259229 NOB1Q9ULX3 412 aaKnown RBP22.77■■□□□ 1.24
CCDC115-201ENST00000259229 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
CCDC115-201ENST00000259229 RLBP1P12271 317 aa22.76■■□□□ 1.23
CCDC115-201ENST00000259229 TRIM27P14373 513 aa22.76■■□□□ 1.23
CCDC115-201ENST00000259229 PDE3AQ14432 1141 aa22.76■■□□□ 1.23
CCDC115-201ENST00000259229 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
CCDC115-201ENST00000259229 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
CCDC115-201ENST00000259229 RGS12O14924 1447 aa22.76■■□□□ 1.23
CCDC115-201ENST00000259229 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
CCDC115-201ENST00000259229 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
CCDC115-201ENST00000259229 CANXP27824 592 aaKnown RBP22.74■■□□□ 1.23
CCDC115-201ENST00000259229 ATF7IPQ6VMQ6 1270 aa22.74■■□□□ 1.23
CCDC115-201ENST00000259229 PANK1Q8TE04 598 aa22.74■■□□□ 1.23
CCDC115-201ENST00000259229 PIGBQ92521 554 aa22.74■■□□□ 1.23
CCDC115-201ENST00000259229 TMOD3Q9NYL9 352 aa22.74■■□□□ 1.23
CCDC115-201ENST00000259229 QTRT2Q9H974 415 aaKnown RBP22.73■■□□□ 1.23
CCDC115-201ENST00000259229 HDGFL1Q5TGJ6 251 aa22.72■■□□□ 1.23
CCDC115-201ENST00000259229 CCDC30Q5VVM6 783 aa22.72■■□□□ 1.23
CCDC115-201ENST00000259229 ILDR2Q71H61 639 aa22.72■■□□□ 1.23
CCDC115-201ENST00000259229 ARHGAP45Q92619 1136 aa22.72■■□□□ 1.23
CCDC115-201ENST00000259229 BRWD3Q6RI45 1802 aa22.72■■□□□ 1.23
CCDC115-201ENST00000259229 TTC5Q8N0Z6 440 aa22.71■■□□□ 1.23
CCDC115-201ENST00000259229 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
CCDC115-201ENST00000259229 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
CCDC115-201ENST00000259229 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
CCDC115-201ENST00000259229 FMNL2Q96PY5 1086 aa22.71■■□□□ 1.23
CCDC115-201ENST00000259229 SLC4A2P04920 1241 aa22.7■■□□□ 1.22
CCDC115-201ENST00000259229 G2E3Q7L622 706 aa22.7■■□□□ 1.22
CCDC115-201ENST00000259229 CLUAP1Q96AJ1 413 aa22.7■■□□□ 1.22
CCDC115-201ENST00000259229 SBF2Q86WG5 1849 aa22.69■■□□□ 1.22
CCDC115-201ENST00000259229 DZIP1LQ8IYY4 767 aaKnown RBP22.69■■□□□ 1.22
CCDC115-201ENST00000259229 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
CCDC115-201ENST00000259229 ABCC4O15439 1325 aa22.69■■□□□ 1.22
CCDC115-201ENST00000259229 IPO8O15397 1037 aaKnown RBP22.68■■□□□ 1.22
CCDC115-201ENST00000259229 PRIM1P49642 420 aaKnown RBP22.68■■□□□ 1.22
CCDC115-201ENST00000259229 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
CCDC115-201ENST00000259229 TJP1Q07157 1748 aa22.68■■□□□ 1.22
CCDC115-201ENST00000259229 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CCDC115-201ENST00000259229 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
CCDC115-201ENST00000259229 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
CCDC115-201ENST00000259229 COG6Q9Y2V7 657 aa22.68■■□□□ 1.22
CCDC115-201ENST00000259229 A0A0G2JS52 829 aa22.67■■□□□ 1.22
CCDC115-201ENST00000259229 MYT1Q01538 1121 aa22.67■■□□□ 1.22
CCDC115-201ENST00000259229 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
CCDC115-201ENST00000259229 PTPRCP08575 1304 aa22.67■■□□□ 1.22
CCDC115-201ENST00000259229 SNRPA1P09661 255 aaKnown RBP22.66■■□□□ 1.22
CCDC115-201ENST00000259229 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
CCDC115-201ENST00000259229 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms