RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
KCTD3-201ENST00000259154 F6X3S4 739 aa17.84■□□□□ 0.45
KCTD3-201ENST00000259154 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
KCTD3-201ENST00000259154 AGLP35573 1532 aa17.84■□□□□ 0.45
KCTD3-201ENST00000259154 VGLL3A8MV65 326 aa17.83■□□□□ 0.45
KCTD3-201ENST00000259154 GIMAP6Q6P9H5 292 aa17.83■□□□□ 0.45
KCTD3-201ENST00000259154 TRMT1Q9NXH9 659 aaKnown RBP17.83■□□□□ 0.45
KCTD3-201ENST00000259154 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.45
KCTD3-201ENST00000259154 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
KCTD3-201ENST00000259154 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
KCTD3-201ENST00000259154 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
KCTD3-201ENST00000259154 RAB3GAP1Q15042 981 aa17.82■□□□□ 0.44
KCTD3-201ENST00000259154 CCDC112Q8NEF3 446 aa17.82■□□□□ 0.44
KCTD3-201ENST00000259154 SETD1AO15047 1707 aaKnown RBP17.82■□□□□ 0.44
KCTD3-201ENST00000259154 TSPOAP1O95153 1857 aa17.81■□□□□ 0.44
KCTD3-201ENST00000259154 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
KCTD3-201ENST00000259154 CD2BP2O95400 341 aaKnown RBP17.8■□□□□ 0.44
KCTD3-201ENST00000259154 TTLL5Q6EMB2 1281 aa17.8■□□□□ 0.44
KCTD3-201ENST00000259154 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
KCTD3-201ENST00000259154 NUTM1Q86Y26 1132 aa17.8■□□□□ 0.44
KCTD3-201ENST00000259154 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
KCTD3-201ENST00000259154 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
KCTD3-201ENST00000259154 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
KCTD3-201ENST00000259154 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
KCTD3-201ENST00000259154 CWC27Q6UX04 472 aaKnown RBP17.79■□□□□ 0.44
KCTD3-201ENST00000259154 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
KCTD3-201ENST00000259154 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
KCTD3-201ENST00000259154 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
KCTD3-201ENST00000259154 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
KCTD3-201ENST00000259154 DYNC1I1O14576 645 aa17.78■□□□□ 0.44
KCTD3-201ENST00000259154 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
KCTD3-201ENST00000259154 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
KCTD3-201ENST00000259154 NOLC1Q14978 699 aaKnown RBP eCLIP17.77■□□□□ 0.44
KCTD3-201ENST00000259154 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
KCTD3-201ENST00000259154 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
KCTD3-201ENST00000259154 BMP2KLQ5H9B9 411 aa17.77■□□□□ 0.44
KCTD3-201ENST00000259154 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
KCTD3-201ENST00000259154 ABCC11Q96J66 1382 aa17.77■□□□□ 0.44
KCTD3-201ENST00000259154 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
KCTD3-201ENST00000259154 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
KCTD3-201ENST00000259154 MNS1Q8NEH6 495 aa17.76■□□□□ 0.43
KCTD3-201ENST00000259154 MCM10Q7L590 875 aa17.76■□□□□ 0.43
KCTD3-201ENST00000259154 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
KCTD3-201ENST00000259154 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
KCTD3-201ENST00000259154 POLR3GO15318 223 aaPredicted RBP17.75■□□□□ 0.43
KCTD3-201ENST00000259154 NUCB1Q02818 461 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 SMC2O95347 1197 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 TNMDQ9H2S6 317 aa17.75■□□□□ 0.43
KCTD3-201ENST00000259154 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
KCTD3-201ENST00000259154 CCDC192P0DO97 292 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 SDSP20132 328 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 FSD2A1L4K1 749 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
KCTD3-201ENST00000259154 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 U2AF2P26368 475 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■■□ 23.4
KCTD3-201ENST00000259154 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
KCTD3-201ENST00000259154 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
KCTD3-201ENST00000259154 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
KCTD3-201ENST00000259154 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
KCTD3-201ENST00000259154 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
KCTD3-201ENST00000259154 DHX37Q8IY37 1157 aaKnown RBP17.73■□□□□ 0.43
KCTD3-201ENST00000259154 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
KCTD3-201ENST00000259154 TNNT1P13805 278 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 NLRP6P59044 892 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 PDILTQ8N807 584 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 PTPRMP28827 1452 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
KCTD3-201ENST00000259154 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.43
KCTD3-201ENST00000259154 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
KCTD3-201ENST00000259154 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
KCTD3-201ENST00000259154 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
KCTD3-201ENST00000259154 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
KCTD3-201ENST00000259154 MBIPQ9NS73 344 aa17.71■□□□□ 0.43
KCTD3-201ENST00000259154 TMEM63CQ9P1W3 806 aa17.71■□□□□ 0.43
KCTD3-201ENST00000259154 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
KCTD3-201ENST00000259154 USP48Q86UV5 1035 aa17.7■□□□□ 0.42
KCTD3-201ENST00000259154 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
KCTD3-201ENST00000259154 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
KCTD3-201ENST00000259154 TPM4P67936 248 aa17.7■□□□□ 0.42
KCTD3-201ENST00000259154 SIL1Q9H173 461 aa17.7■□□□□ 0.42
KCTD3-201ENST00000259154 TOMM22Q9NS69 142 aa17.7■□□□□ 0.42
KCTD3-201ENST00000259154 PDE4CQ08493 712 aa17.69■□□□□ 0.42
KCTD3-201ENST00000259154 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
KCTD3-201ENST00000259154 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
KCTD3-201ENST00000259154 CPA1P15085 419 aa17.69■□□□□ 0.42
KCTD3-201ENST00000259154 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
KCTD3-201ENST00000259154 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
KCTD3-201ENST00000259154 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
KCTD3-201ENST00000259154 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
KCTD3-201ENST00000259154 NUP62CLQ9H1M0 184 aa17.68■□□□□ 0.42
KCTD3-201ENST00000259154 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
KCTD3-201ENST00000259154 NOL7Q9UMY1 257 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms