RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
CALCOCO2-201ENST00000258947 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
CALCOCO2-201ENST00000258947 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CALCOCO2-201ENST00000258947 KAT6BQ8WYB5 2073 aa10.86□□□□□ -0.67
CALCOCO2-201ENST00000258947 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
CALCOCO2-201ENST00000258947 UBTFL1P0CB47 393 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 C9orf78Q9NZ63 289 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 PIP4K2AP48426 406 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
CALCOCO2-201ENST00000258947 USP19O94966 1318 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 CRB1P82279 1406 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 GNAI2P04899 355 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 PI4KAP2A4QPH2 592 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 PI4KAP1Q8N8J0 262 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 ABCC4O15439 1325 aa10.84□□□□□ -0.67
CALCOCO2-201ENST00000258947 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.67
CALCOCO2-201ENST00000258947 GCC1Q96CN9 775 aa10.83□□□□□ -0.67
CALCOCO2-201ENST00000258947 GNAI3P08754 354 aa10.83□□□□□ -0.68
CALCOCO2-201ENST00000258947 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
CALCOCO2-201ENST00000258947 DDX58O95786 925 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 HSP90AB1P08238 724 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 DBF4Q9UBU7 674 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 EXOC6BQ9Y2D4 811 aa10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 LARP1Q6PKG0 1096 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 MSH5O43196 834 aa10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 SMARCA5O60264 1052 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-201ENST00000258947 PHKG2P15735 406 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 C8orf34Q49A92 452 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 RTL5Q5HYW3 569 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 LRRFIP2Q9Y608 721 aaKnown RBP10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 IL2RBP14784 551 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 DCCP43146 1447 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 DNAAF4Q8WXU2 420 aa10.81□□□□□ -0.68
CALCOCO2-201ENST00000258947 SMC5Q8IY18 1101 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 RBM42Q9BTD8 480 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 SLC52A2Q9HAB3 445 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 BABAM1Q9NWV8 329 aa10.8□□□□□ -0.68
CALCOCO2-201ENST00000258947 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 NUCB1Q02818 461 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 ZNF496Q96IT1 587 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 DLG5Q8TDM6 1919 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 UBAP1LF5GYI3 381 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 CYP27B1O15528 508 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
CALCOCO2-201ENST00000258947 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 SRGAP3O43295 1099 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 BECN1Q14457 450 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 AEBP2Q6ZN18 517 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 ANKRD44Q8N8A2 993 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 NFAT5O94916 1531 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 CASC1Q6TDU7 716 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 NWD1Q149M9 1564 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 SEC24BO95487 1268 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 HSP90AA1P07900 732 aaKnown RBP10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 C16orf71Q8IYS4 520 aaPredicted RBP10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
CALCOCO2-201ENST00000258947 LTN1O94822 1766 aa10.77□□□□□ -0.68
CALCOCO2-201ENST00000258947 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.68
CALCOCO2-201ENST00000258947 SIRT2Q8IXJ6 389 aa10.77□□□□□ -0.68
CALCOCO2-201ENST00000258947 TMOD3Q9NYL9 352 aa10.77□□□□□ -0.68
CALCOCO2-201ENST00000258947 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 HYPKQ9NX55 129 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 TOM1O60784 492 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 RILPL2Q969X0 211 aa10.77□□□□□ -0.69
CALCOCO2-201ENST00000258947 PXDNQ92626 1479 aa10.76□□□□□ -0.69
CALCOCO2-201ENST00000258947 XAGE3Q8WTP9 111 aa10.76□□□□□ -0.69
CALCOCO2-201ENST00000258947 MYD88Q99836 296 aa10.76□□□□□ -0.69
CALCOCO2-201ENST00000258947 TSHZ3Q63HK5 1081 aa10.76□□□□□ -0.69
CALCOCO2-201ENST00000258947 USP16Q9Y5T5 823 aa10.76□□□□□ -0.69
CALCOCO2-201ENST00000258947 HOXB7P09629 217 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 LRRCC1Q9C099 1032 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms