RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 NBPF4Q96M43 638 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 ARID3AQ99856 593 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 C22orf23Q9BZE7 217 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
RPA1-201ENST00000254719 ADGRL3Q9HAR2 1447 aa11.51□□□□□ -0.57
RPA1-201ENST00000254719 GOLGA6L22H0YM25 854 aa11.5□□□□□ -0.57
RPA1-201ENST00000254719 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
RPA1-201ENST00000254719 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
RPA1-201ENST00000254719 PXDNLA1KZ92 1463 aa11.5□□□□□ -0.57
RPA1-201ENST00000254719 CASC1Q6TDU7 716 aa11.5□□□□□ -0.57
RPA1-201ENST00000254719 NUTM2GQ5VZR2 741 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 ARFGEF2Q9Y6D5 1785 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
RPA1-201ENST00000254719 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 PKP1Q13835 747 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 UNC5CLQ8IV45 518 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 PKNOX2Q96KN3 472 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
RPA1-201ENST00000254719 CYP2E1P05181 493 aaPredicted RBP11.49□□□□□ -0.57
RPA1-201ENST00000254719 ZDHHC9Q9Y397 364 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
RPA1-201ENST00000254719 ADCY9O60503 1353 aa11.48□□□□□ -0.57
RPA1-201ENST00000254719 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
RPA1-201ENST00000254719 SNX21Q969T3 373 aa11.48□□□□□ -0.57
RPA1-201ENST00000254719 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
RPA1-201ENST00000254719 CHAMP1Q96JM3 812 aa11.47□□□□□ -0.57
RPA1-201ENST00000254719 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
RPA1-201ENST00000254719 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
RPA1-201ENST00000254719 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
RPA1-201ENST00000254719 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 MRC1P22897 1456 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 MFAP1P55081 439 aaKnown RBP11.46□□□□□ -0.57
RPA1-201ENST00000254719 USP26Q9BXU7 913 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
RPA1-201ENST00000254719 TTC22Q5TAA0 569 aa11.46□□□□□ -0.58
RPA1-201ENST00000254719 NAP1L5Q96NT1 182 aaPredicted RBP11.46□□□□□ -0.58
RPA1-201ENST00000254719 ORAI2Q96SN7 254 aa11.46□□□□□ -0.58
RPA1-201ENST00000254719 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.58
RPA1-201ENST00000254719 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.58
RPA1-201ENST00000254719 GCC1Q96CN9 775 aa11.46□□□□□ -0.58
RPA1-201ENST00000254719 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.58
RPA1-201ENST00000254719 LAMB4A4D0S4 1761 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 SOX12O15370 315 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 SDSP20132 328 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 PDIA6Q15084 440 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 ANKRD45Q5TZF3 282 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 NHSL1Q5SYE7 1610 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
RPA1-201ENST00000254719 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
RPA1-201ENST00000254719 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
RPA1-201ENST00000254719 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
RPA1-201ENST00000254719 MEGF6O75095 1541 aa11.44□□□□□ -0.58
RPA1-201ENST00000254719 CLEC17AQ6ZS10 378 aa11.44□□□□□ -0.58
RPA1-201ENST00000254719 PTPRCP08575 1304 aa11.44□□□□□ -0.58
RPA1-201ENST00000254719 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
RPA1-201ENST00000254719 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
RPA1-201ENST00000254719 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
RPA1-201ENST00000254719 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
RPA1-201ENST00000254719 PTMSP20962 102 aa11.43□□□□□ -0.58
RPA1-201ENST00000254719 PALD1Q9ULE6 856 aa11.43□□□□□ -0.58
RPA1-201ENST00000254719 ABCC6O95255 1503 aa11.42□□□□□ -0.58
RPA1-201ENST00000254719 ZMYND15Q9H091 742 aa11.42□□□□□ -0.58
RPA1-201ENST00000254719 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
RPA1-201ENST00000254719 C1orf167Q5SNV9 1468 aa11.42□□□□□ -0.58
RPA1-201ENST00000254719 POLA2Q14181 598 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 IP6K1Q92551 441 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 CASZ1Q86V15 1759 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 NWD2Q9ULI1 1742 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 NBPF7P0C2Y1 421 aaPredicted RBP11.41□□□□□ -0.58
RPA1-201ENST00000254719 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
RPA1-201ENST00000254719 MCM4P33991 863 aa11.4□□□□□ -0.58
RPA1-201ENST00000254719 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
RPA1-201ENST00000254719 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
RPA1-201ENST00000254719 DDX17Q92841 729 aaKnown RBP11.4□□□□□ -0.58
RPA1-201ENST00000254719 TNPO1Q92973 898 aaKnown RBP11.4□□□□□ -0.58
RPA1-201ENST00000254719 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
RPA1-201ENST00000254719 NLRP6P59044 892 aa11.39□□□□□ -0.59
RPA1-201ENST00000254719 SOS1Q07889 1333 aaPredicted RBP11.39□□□□□ -0.59
RPA1-201ENST00000254719 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
RPA1-201ENST00000254719 FLIIQ13045 1269 aa11.39□□□□□ -0.59
RPA1-201ENST00000254719 L1TD1Q5T7N2 865 aaKnown RBP11.39□□□□□ -0.59
RPA1-201ENST00000254719 COL15A1P39059 1388 aa11.39□□□□□ -0.59
RPA1-201ENST00000254719 OVOS2A0A0G2JMS6 1433 aa11.39□□□□□ -0.59
RPA1-201ENST00000254719 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
RPA1-201ENST00000254719 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
RPA1-201ENST00000254719 HTATSF1O43719 755 aaKnown RBP11.38□□□□□ -0.59
RPA1-201ENST00000254719 PDE1AP54750 535 aa11.38□□□□□ -0.59
RPA1-201ENST00000254719 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
RPA1-201ENST00000254719 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
RPA1-201ENST00000254719 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
RPA1-201ENST00000254719 COL4A1P02462 1669 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms