RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 SF3A1Q15459 793 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 HOMER1Q86YM7 354 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 SNX21Q969T3 373 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 NCOA2Q15596 1464 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 ROCK2O75116 1388 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 ST18O60284 1047 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 SYCP1Q15431 976 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 KIAA1524Q8TCG1 905 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 RBM42Q9BTD8 480 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 EIF3AQ14152 1382 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 SLU7O95391 586 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 BDNFP23560 247 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 OAS2P29728 719 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 PSMD2Q13200 908 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 C11orf96Q7Z7L8 435 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 PACS2Q86VP3 889 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 CCDC146Q8IYE0 955 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 CENPHQ9H3R5 247 aa9.01□□□□□ -0.97
USP29-201ENST00000254181 TRMT1Q9NXH9 659 aaKnown RBP9.01□□□□□ -0.97
USP29-201ENST00000254181 KIF21BO75037 1637 aa9□□□□□ -0.97
USP29-201ENST00000254181 MUM1L1Q5H9M0 696 aa9□□□□□ -0.97
USP29-201ENST00000254181 FILIP1Q7Z7B0 1213 aa9□□□□□ -0.97
USP29-201ENST00000254181 SMARCE1Q969G3 411 aa9□□□□□ -0.97
USP29-201ENST00000254181 SPTLC3Q9NUV7 552 aa9□□□□□ -0.97
USP29-201ENST00000254181 CCP110O43303 1012 aa9□□□□□ -0.97
USP29-201ENST00000254181 HSP90B2PQ58FF3 399 aa9□□□□□ -0.97
USP29-201ENST00000254181 CARD11Q9BXL7 1154 aa9□□□□□ -0.97
USP29-201ENST00000254181 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
USP29-201ENST00000254181 KIF3CO14782 793 aa9□□□□□ -0.97
USP29-201ENST00000254181 GCKP35557 465 aa9□□□□□ -0.97
USP29-201ENST00000254181 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
USP29-201ENST00000254181 ARHGAP29Q52LW3 1261 aa9□□□□□ -0.97
USP29-201ENST00000254181 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
USP29-201ENST00000254181 CCDC186Q7Z3E2 898 aa9□□□□□ -0.97
USP29-201ENST00000254181 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
USP29-201ENST00000254181 GPT2Q8TD30 523 aa9□□□□□ -0.97
USP29-201ENST00000254181 SREK1Q8WXA9 508 aaKnown RBP9□□□□□ -0.97
USP29-201ENST00000254181 ERO1AQ96HE7 468 aa9□□□□□ -0.97
USP29-201ENST00000254181 SRRTQ9BXP5 876 aaKnown RBP9□□□□□ -0.97
USP29-201ENST00000254181 NBPF3Q9H094 633 aa9□□□□□ -0.97
USP29-201ENST00000254181 ZSCAN21Q9Y5A6 473 aaPredicted RBP9□□□□□ -0.97
USP29-201ENST00000254181 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
USP29-201ENST00000254181 APLP1P51693 650 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 FBXO18Q8NFZ0 1043 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
USP29-201ENST00000254181 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 IGSF5Q9NSI5 407 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 SMAPO00193 183 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 PEX19P40855 299 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 ST5P78524 1137 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 TRDNQ13061 729 aa8.99□□□□□ -0.97
USP29-201ENST00000254181 CHMP3Q9Y3E7 222 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 DMRT2Q9Y5R5 561 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 CCT2P78371 535 aaKnown RBP8.98□□□□□ -0.97
USP29-201ENST00000254181 NBPF8Q3BBV2 869 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 JAKMIP3Q5VZ66 844 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 CHAMP1Q96JM3 812 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 CCDC85AQ96PX6 553 aaPredicted RBP8.98□□□□□ -0.97
USP29-201ENST00000254181 JPH2Q9BR39 696 aaPredicted RBP8.98□□□□□ -0.97
USP29-201ENST00000254181 LNPKQ9C0E8 428 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 VEZTQ9HBM0 779 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 SPATS2LQ9NUQ6 558 aaKnown RBP8.98□□□□□ -0.97
USP29-201ENST00000254181 AMOTL2Q9Y2J4 779 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
USP29-201ENST00000254181 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
USP29-201ENST00000254181 U2AF1L5P0DN76 240 aaPredicted RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP29-201ENST00000254181 WDR63Q8IWG1 891 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 DDX11Q96FC9 970 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 ERCC6LQ2NKX8 1250 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 PDILTQ8N807 584 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 JMYQ8N9B5 988 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 GNL3LQ9NVN8 582 aaKnown RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 CCDC194A0A1B0GVG4 234 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 SETSIPP0DME0 302 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 CASTP20810 708 aaKnown RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 NAA25Q14CX7 972 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 RBBP5Q15291 538 aaKnown RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 ANKRD18AQ8IVF6 992 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 HELBQ8NG08 1087 aaPredicted RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 N4BP2L2Q92802 583 aaPredicted RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
USP29-201ENST00000254181 BSDC1Q9NW68 430 aaPredicted RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 FBXO9Q9UK97 447 aaPredicted RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 DIS3Q9Y2L1 958 aaKnown RBP8.97□□□□□ -0.97
USP29-201ENST00000254181 ERLIN2O94905 339 aa8.96□□□□□ -0.97
USP29-201ENST00000254181 ACTN2P35609 894 aa8.96□□□□□ -0.97
USP29-201ENST00000254181 CLNS1AP54105 237 aaKnown RBP8.96□□□□□ -0.97
USP29-201ENST00000254181 MCCD1P59942 119 aaPredicted RBP8.96□□□□□ -0.97
USP29-201ENST00000254181 RPUSD2Q8IZ73 545 aaKnown RBP8.96□□□□□ -0.97
USP29-201ENST00000254181 BORCS6Q96GS4 357 aa8.96□□□□□ -0.97
USP29-201ENST00000254181 TRIM6Q9C030 488 aaPredicted RBP8.96□□□□□ -0.97
USP29-201ENST00000254181 VPS18Q9P253 973 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms