RNA–Protein interactions for RNA: ENST00000250823.4

VCY1B-201, Transcript of variable charge Y-linked 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCY1B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCY1B-201ENST00000250823 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
VCY1B-201ENST00000250823 COL24A1Q17RW2 1714 aa25.84■■□□□ 1.73
VCY1B-201ENST00000250823 HMOX1P09601 288 aa25.82■■□□□ 1.72
VCY1B-201ENST00000250823 SSFA2P28290 1259 aa25.82■■□□□ 1.72
VCY1B-201ENST00000250823 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
VCY1B-201ENST00000250823 CFAP53Q96M91 514 aa25.82■■□□□ 1.72
VCY1B-201ENST00000250823 COL3A1P02461 1466 aaPredicted RBP25.8■■□□□ 1.72
VCY1B-201ENST00000250823 LINC00116Q8NCU8 138 aa25.8■■□□□ 1.72
VCY1B-201ENST00000250823 ZNF831Q5JPB2 1677 aa25.8■■□□□ 1.72
VCY1B-201ENST00000250823 ITPK1Q13572 414 aa25.78■■□□□ 1.72
VCY1B-201ENST00000250823 RBM42Q9BTD8 480 aaKnown RBP25.78■■□□□ 1.72
VCY1B-201ENST00000250823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.77■■□□□ 1.72
VCY1B-201ENST00000250823 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
VCY1B-201ENST00000250823 NFATC2IPQ8NCF5 419 aa25.77■■□□□ 1.72
VCY1B-201ENST00000250823 GNPATO15228 680 aa25.75■■□□□ 1.71
VCY1B-201ENST00000250823 PHF14O94880 888 aa25.75■■□□□ 1.71
VCY1B-201ENST00000250823 NUDCQ9Y266 331 aa25.75■■□□□ 1.71
VCY1B-201ENST00000250823 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
VCY1B-201ENST00000250823 MTHFSDQ2M296 383 aaKnown RBP25.74■■□□□ 1.71
VCY1B-201ENST00000250823 RC3H1Q5TC82 1133 aaKnown RBP25.74■■□□□ 1.71
VCY1B-201ENST00000250823 KLHL34Q8N239 644 aa25.74■■□□□ 1.71
VCY1B-201ENST00000250823 SLC52A2Q9HAB3 445 aa25.74■■□□□ 1.71
VCY1B-201ENST00000250823 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
VCY1B-201ENST00000250823 CNTNAP4Q9C0A0 1308 aa25.72■■□□□ 1.71
VCY1B-201ENST00000250823 RNMTO43148 476 aaKnown RBP25.72■■□□□ 1.71
VCY1B-201ENST00000250823 MSL1Q68DK7 614 aa25.72■■□□□ 1.71
VCY1B-201ENST00000250823 GAS2L2Q8NHY3 880 aa25.72■■□□□ 1.71
VCY1B-201ENST00000250823 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
VCY1B-201ENST00000250823 ADRA2BP18089 450 aa25.71■■□□□ 1.71
VCY1B-201ENST00000250823 PPP2R1AP30153 589 aa25.71■■□□□ 1.71
VCY1B-201ENST00000250823 SLC4A9Q96Q91 983 aa25.71■■□□□ 1.71
VCY1B-201ENST00000250823 MRC1P22897 1456 aa25.71■■□□□ 1.71
VCY1B-201ENST00000250823 PTCD1O75127 700 aaKnown RBP25.69■■□□□ 1.7
VCY1B-201ENST00000250823 YY1P25490 414 aa25.69■■□□□ 1.7
VCY1B-201ENST00000250823 AMIGO3Q86WK7 504 aa25.69■■□□□ 1.7
VCY1B-201ENST00000250823 TRAPPC3LQ5T215 181 aa25.68■■□□□ 1.7
VCY1B-201ENST00000250823 LGR6Q9HBX8 967 aa25.68■■□□□ 1.7
VCY1B-201ENST00000250823 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
VCY1B-201ENST00000250823 ADAMTS7Q9UKP4 1686 aa25.67■■□□□ 1.7
VCY1B-201ENST00000250823 COL5A3P25940 1745 aaPredicted RBP25.66■■□□□ 1.7
VCY1B-201ENST00000250823 RPS6KA4O75676 772 aa25.66■■□□□ 1.7
VCY1B-201ENST00000250823 CICQ96RK0 1608 aaPredicted RBP25.66■■□□□ 1.7
VCY1B-201ENST00000250823 GNAT3A8MTJ3 354 aa25.65■■□□□ 1.7
VCY1B-201ENST00000250823 GPR162Q16538 588 aa25.64■■□□□ 1.7
VCY1B-201ENST00000250823 U2AF1L5P0DN76 240 aaPredicted RBP25.62■■□□□ 1.69
VCY1B-201ENST00000250823 PRKAR2BP31323 418 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 RFC4P35249 363 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 U2AF1Q01081 240 aaKnown RBP eCLIP25.62■■□□□ 1.69
VCY1B-201ENST00000250823 TEFQ10587 303 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 SMIM5Q71RC9 77 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 NLGN1Q8N2Q7 840 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 RSPH6AQ9H0K4 717 aa25.62■■□□□ 1.69
VCY1B-201ENST00000250823 FCHSD2O94868 740 aa25.61■■□□□ 1.69
VCY1B-201ENST00000250823 CRKLP46109 303 aaKnown RBP25.61■■□□□ 1.69
VCY1B-201ENST00000250823 NLGN2Q8NFZ4 835 aa25.61■■□□□ 1.69
VCY1B-201ENST00000250823 TTC5Q8N0Z6 440 aa25.6■■□□□ 1.69
VCY1B-201ENST00000250823 VSIG10Q8N0Z9 540 aa25.6■■□□□ 1.69
VCY1B-201ENST00000250823 ARHGEF1Q92888 912 aaKnown RBP25.6■■□□□ 1.69
VCY1B-201ENST00000250823 TJP1Q07157 1748 aa25.58■■□□□ 1.69
VCY1B-201ENST00000250823 SLC39A6Q13433 755 aa25.58■■□□□ 1.69
VCY1B-201ENST00000250823 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.68
VCY1B-201ENST00000250823 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
VCY1B-201ENST00000250823 GRIN3BO60391 1043 aa25.56■■□□□ 1.68
VCY1B-201ENST00000250823 DNAJC10Q8IXB1 793 aa25.56■■□□□ 1.68
VCY1B-201ENST00000250823 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
VCY1B-201ENST00000250823 KCPQ6ZWJ8 1503 aa25.56■■□□□ 1.68
VCY1B-201ENST00000250823 NEFMP07197 916 aa25.55■■□□□ 1.68
VCY1B-201ENST00000250823 MMP10P09238 476 aa25.55■■□□□ 1.68
VCY1B-201ENST00000250823 PHACTR3Q96KR7 559 aa25.55■■□□□ 1.68
VCY1B-201ENST00000250823 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
VCY1B-201ENST00000250823 CEMIPQ8WUJ3 1361 aa25.55■■□□□ 1.68
VCY1B-201ENST00000250823 RTF1Q92541 710 aaKnown RBP25.54■■□□□ 1.68
VCY1B-201ENST00000250823 MYH14Q7Z406 1995 aaKnown RBP25.53■■□□□ 1.68
VCY1B-201ENST00000250823 GYS1P13807 737 aa25.53■■□□□ 1.68
VCY1B-201ENST00000250823 RALBP1Q15311 655 aa25.53■■□□□ 1.68
VCY1B-201ENST00000250823 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
VCY1B-201ENST00000250823 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
VCY1B-201ENST00000250823 ZNF790Q6PG37 636 aa25.52■■□□□ 1.68
VCY1B-201ENST00000250823 TEX13AQ9BXU3 409 aaPredicted RBP25.52■■□□□ 1.68
VCY1B-201ENST00000250823 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
VCY1B-201ENST00000250823 STARD3NLO95772 234 aa25.51■■□□□ 1.67
VCY1B-201ENST00000250823 USP42Q9H9J4 1324 aaKnown RBP25.51■■□□□ 1.67
VCY1B-201ENST00000250823 UBR2Q8IWV8 1755 aa25.51■■□□□ 1.67
VCY1B-201ENST00000250823 PNNQ9H307 717 aaKnown RBP25.5■■□□□ 1.67
VCY1B-201ENST00000250823 PARP3Q9Y6F1 533 aa25.5■■□□□ 1.67
VCY1B-201ENST00000250823 CHD4Q14839 1912 aa25.49■■□□□ 1.67
VCY1B-201ENST00000250823 C4AP0C0L4 1744 aa25.49■■□□□ 1.67
VCY1B-201ENST00000250823 SOS1Q07889 1333 aaPredicted RBP25.49■■□□□ 1.67
VCY1B-201ENST00000250823 ZPR1O75312 459 aa25.48■■□□□ 1.67
VCY1B-201ENST00000250823 FMNL2Q96PY5 1086 aa25.48■■□□□ 1.67
VCY1B-201ENST00000250823 HEG1Q9ULI3 1381 aa25.47■■□□□ 1.67
VCY1B-201ENST00000250823 SIPA1L3O60292 1781 aaPredicted RBP25.47■■□□□ 1.67
VCY1B-201ENST00000250823 BTBD11A6QL63 1104 aa25.47■■□□□ 1.67
VCY1B-201ENST00000250823 YBX3P16989 372 aaKnown RBP eCLIP25.46■■□□□ 1.67
VCY1B-201ENST00000250823 TGFB2P61812 414 aa25.46■■□□□ 1.67
VCY1B-201ENST00000250823 ZNF496Q96IT1 587 aaPredicted RBP25.46■■□□□ 1.67
VCY1B-201ENST00000250823 ZBTB1Q9Y2K1 713 aa25.46■■□□□ 1.67
VCY1B-201ENST00000250823 COL15A1P39059 1388 aa25.45■■□□□ 1.67
VCY1B-201ENST00000250823 DDX10Q13206 875 aaKnown RBP25.45■■□□□ 1.66
VCY1B-201ENST00000250823 SRP68Q9UHB9 627 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms