RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
SNRNP27-201ENST00000244227 RGS3P49796 1198 aa17.43■□□□□ 0.38
SNRNP27-201ENST00000244227 VIRMAQ69YN4 1812 aaKnown RBP17.43■□□□□ 0.38
SNRNP27-201ENST00000244227 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
SNRNP27-201ENST00000244227 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
SNRNP27-201ENST00000244227 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
SNRNP27-201ENST00000244227 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
SNRNP27-201ENST00000244227 HOXB7P09629 217 aa17.42■□□□□ 0.38
SNRNP27-201ENST00000244227 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
SNRNP27-201ENST00000244227 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
SNRNP27-201ENST00000244227 CYP27B1O15528 508 aa17.41■□□□□ 0.38
SNRNP27-201ENST00000244227 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
SNRNP27-201ENST00000244227 AHDC1Q5TGY3 1603 aaPredicted RBP17.41■□□□□ 0.38
SNRNP27-201ENST00000244227 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
SNRNP27-201ENST00000244227 HEG1Q9ULI3 1381 aa17.41■□□□□ 0.38
SNRNP27-201ENST00000244227 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
SNRNP27-201ENST00000244227 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
SNRNP27-201ENST00000244227 FLIIQ13045 1269 aa17.4■□□□□ 0.38
SNRNP27-201ENST00000244227 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
SNRNP27-201ENST00000244227 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
SNRNP27-201ENST00000244227 F6X3S4 739 aa17.39■□□□□ 0.37
SNRNP27-201ENST00000244227 SIRT2Q8IXJ6 389 aa17.39■□□□□ 0.37
SNRNP27-201ENST00000244227 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
SNRNP27-201ENST00000244227 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
SNRNP27-201ENST00000244227 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
SNRNP27-201ENST00000244227 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SNRNP27-201ENST00000244227 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
SNRNP27-201ENST00000244227 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
SNRNP27-201ENST00000244227 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
SNRNP27-201ENST00000244227 MRC1P22897 1456 aa17.36■□□□□ 0.37
SNRNP27-201ENST00000244227 CACNA1FO60840 1977 aa17.36■□□□□ 0.37
SNRNP27-201ENST00000244227 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 MEIS3Q99687 375 aa17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
SNRNP27-201ENST00000244227 EVA1CP58658 441 aa17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 ZNF790Q6PG37 636 aa17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
SNRNP27-201ENST00000244227 ATP10DQ9P241 1426 aa17.33■□□□□ 0.37
SNRNP27-201ENST00000244227 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.37
SNRNP27-201ENST00000244227 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.37
SNRNP27-201ENST00000244227 SLC39A6Q13433 755 aa17.33■□□□□ 0.37
SNRNP27-201ENST00000244227 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.37
SNRNP27-201ENST00000244227 IL2RBP14784 551 aa17.33■□□□□ 0.36
SNRNP27-201ENST00000244227 NUCB1Q02818 461 aa17.32■□□□□ 0.36
SNRNP27-201ENST00000244227 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
SNRNP27-201ENST00000244227 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 RPAP2Q8IXW5 612 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-201ENST00000244227 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
SNRNP27-201ENST00000244227 ANXA1P04083 346 aa17.3■□□□□ 0.36
SNRNP27-201ENST00000244227 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
SNRNP27-201ENST00000244227 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
SNRNP27-201ENST00000244227 COL14A1Q05707 1796 aaKnown RBP17.29■□□□□ 0.36
SNRNP27-201ENST00000244227 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
SNRNP27-201ENST00000244227 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-201ENST00000244227 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
SNRNP27-201ENST00000244227 CABP4P57796 275 aa17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 PDIA6Q15084 440 aa17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 DCTPP1Q9H773 170 aa17.28■□□□□ 0.36
SNRNP27-201ENST00000244227 PHLPP1O60346 1717 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 ADCY9O60503 1353 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 C5P01031 1676 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 TOM1O60784 492 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
SNRNP27-201ENST00000244227 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 MSH5O43196 834 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 DISP2A7MBM2 1401 aa17.25■□□□□ 0.35
SNRNP27-201ENST00000244227 GNAI2P04899 355 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 GLI3P10071 1580 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 GNAI3P08754 354 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 TTC5Q8N0Z6 440 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
SNRNP27-201ENST00000244227 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms