RNA–Protein interactions for RNA: ENST00000244070.7

PPP4R1L-201, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 1,474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-201ENST00000244070 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
PPP4R1L-201ENST00000244070 EYA1Q99502 592 aa16.03■□□□□ 0.16
PPP4R1L-201ENST00000244070 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
PPP4R1L-201ENST00000244070 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
PPP4R1L-201ENST00000244070 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
PPP4R1L-201ENST00000244070 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
PPP4R1L-201ENST00000244070 C4AP0C0L4 1744 aa16.02■□□□□ 0.15
PPP4R1L-201ENST00000244070 KDRP35968 1356 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 MMP10P09238 476 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 PHKG2P15735 406 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 ATG3Q9NT62 314 aa16.01■□□□□ 0.15
PPP4R1L-201ENST00000244070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
PPP4R1L-201ENST00000244070 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
PPP4R1L-201ENST00000244070 SLC4A9Q96Q91 983 aa15.99■□□□□ 0.15
PPP4R1L-201ENST00000244070 ARFGEF1Q9Y6D6 1849 aa15.99■□□□□ 0.15
PPP4R1L-201ENST00000244070 CDCA8Q53HL2 280 aa15.98■□□□□ 0.15
PPP4R1L-201ENST00000244070 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
PPP4R1L-201ENST00000244070 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
PPP4R1L-201ENST00000244070 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
PPP4R1L-201ENST00000244070 BCS1LQ9Y276 419 aa15.96■□□□□ 0.14
PPP4R1L-201ENST00000244070 TGFB2P61812 414 aa15.95■□□□□ 0.14
PPP4R1L-201ENST00000244070 EIF4A2Q14240 407 aaKnown RBP15.95■□□□□ 0.14
PPP4R1L-201ENST00000244070 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
PPP4R1L-201ENST00000244070 WDR90Q96KV7 1748 aa15.95■□□□□ 0.14
PPP4R1L-201ENST00000244070 TRAPPC3LQ5T215 181 aa15.94■□□□□ 0.14
PPP4R1L-201ENST00000244070 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
PPP4R1L-201ENST00000244070 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 GYS1P13807 737 aa15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 DPEP1P16444 411 aa15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 NMRK2Q9NPI5 230 aa15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 PLEKHG2Q9H7P9 1386 aa15.93■□□□□ 0.14
PPP4R1L-201ENST00000244070 SBF1O95248 1867 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 TOMM70O94826 608 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 APLP1P51693 650 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 TJP1Q07157 1748 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 CNTNAP4Q9C0A0 1308 aa15.92■□□□□ 0.14
PPP4R1L-201ENST00000244070 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 KCNA3P22001 575 aa15.91■□□□□ 0.14
PPP4R1L-201ENST00000244070 RPS6KA4O75676 772 aa15.9■□□□□ 0.14
PPP4R1L-201ENST00000244070 FCHSD2O94868 740 aa15.9■□□□□ 0.14
PPP4R1L-201ENST00000244070 CCDC87Q9NVE4 849 aa15.9■□□□□ 0.14
PPP4R1L-201ENST00000244070 RFC4P35249 363 aa15.89■□□□□ 0.13
PPP4R1L-201ENST00000244070 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
PPP4R1L-201ENST00000244070 SCN11AQ9UI33 1791 aa15.88■□□□□ 0.13
PPP4R1L-201ENST00000244070 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
PPP4R1L-201ENST00000244070 PARP3Q9Y6F1 533 aa15.88■□□□□ 0.13
PPP4R1L-201ENST00000244070 C9orf131Q5VYM1 1079 aa15.87■□□□□ 0.13
PPP4R1L-201ENST00000244070 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
PPP4R1L-201ENST00000244070 AFDNP55196 1824 aaKnown RBP15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 TNRC6CQ9HCJ0 1690 aaKnown RBP15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 KCPQ6ZWJ8 1503 aa15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 HTRA3P83110 453 aa15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 DDR1Q08345 913 aa15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
PPP4R1L-201ENST00000244070 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 CABP4P57796 275 aa15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 FKBP8Q14318 412 aa15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 AEBP1Q8IUX7 1158 aa15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
PPP4R1L-201ENST00000244070 CRKLP46109 303 aaKnown RBP15.84■□□□□ 0.13
PPP4R1L-201ENST00000244070 RBM46Q8TBY0 533 aaKnown RBP15.84■□□□□ 0.13
PPP4R1L-201ENST00000244070 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
PPP4R1L-201ENST00000244070 PIM2Q9P1W9 311 aa15.84■□□□□ 0.13
PPP4R1L-201ENST00000244070 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
PPP4R1L-201ENST00000244070 CHRNA5P30532 468 aa15.83■□□□□ 0.12
PPP4R1L-201ENST00000244070 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
PPP4R1L-201ENST00000244070 DLEC1Q9Y238 1755 aa15.83■□□□□ 0.12
PPP4R1L-201ENST00000244070 MTHFSP49914 203 aa15.82■□□□□ 0.12
PPP4R1L-201ENST00000244070 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
PPP4R1L-201ENST00000244070 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
PPP4R1L-201ENST00000244070 NRXN2Q9P2S2 1712 aa15.81■□□□□ 0.12
PPP4R1L-201ENST00000244070 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
PPP4R1L-201ENST00000244070 RNF181Q9P0P0 153 aa15.81■□□□□ 0.12
PPP4R1L-201ENST00000244070 POLRMTO00411 1230 aaKnown RBP15.8■□□□□ 0.12
PPP4R1L-201ENST00000244070 KLRG1Q96E93 195 aa15.8■□□□□ 0.12
PPP4R1L-201ENST00000244070 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 TM4SF1P30408 202 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 FSTL1Q12841 308 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 C1orf141Q5JVX7 400 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 C16orf71Q8IYS4 520 aaPredicted RBP15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 RRAGCQ9HB90 399 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 KDM2BQ8NHM5 1336 aa15.79■□□□□ 0.12
PPP4R1L-201ENST00000244070 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
PPP4R1L-201ENST00000244070 PANK3Q9H999 370 aa15.78■□□□□ 0.12
PPP4R1L-201ENST00000244070 COL13A1Q5TAT6 717 aaPredicted RBP15.78■□□□□ 0.12
PPP4R1L-201ENST00000244070 SULT6B1Q6IMI4 303 aa15.78■□□□□ 0.12
PPP4R1L-201ENST00000244070 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
PPP4R1L-201ENST00000244070 RASSF7Q02833 373 aa15.77■□□□□ 0.11
PPP4R1L-201ENST00000244070 USPL1Q5W0Q7 1092 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms