RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 KCNQ4P56696 695 aa22.54■■□□□ 1.2
CLTA-201ENST00000242285 C1orf141Q5JVX7 400 aa22.54■■□□□ 1.2
CLTA-201ENST00000242285 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
CLTA-201ENST00000242285 ZNF784Q8NCA9 323 aaPredicted RBP22.53■■□□□ 1.2
CLTA-201ENST00000242285 CHD4Q14839 1912 aa22.52■■□□□ 1.2
CLTA-201ENST00000242285 CICQ96RK0 1608 aaPredicted RBP22.52■■□□□ 1.2
CLTA-201ENST00000242285 HMOX1P09601 288 aa22.51■■□□□ 1.19
CLTA-201ENST00000242285 CNGB1Q14028 1251 aaPredicted RBP22.51■■□□□ 1.19
CLTA-201ENST00000242285 AKAP4Q5JQC9 854 aa22.51■■□□□ 1.19
CLTA-201ENST00000242285 COL5A3P25940 1745 aaPredicted RBP22.51■■□□□ 1.19
CLTA-201ENST00000242285 MRC1P22897 1456 aa22.5■■□□□ 1.19
CLTA-201ENST00000242285 GPR162Q16538 588 aa22.5■■□□□ 1.19
CLTA-201ENST00000242285 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CLTA-201ENST00000242285 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
CLTA-201ENST00000242285 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
CLTA-201ENST00000242285 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
CLTA-201ENST00000242285 LOC102724428A0A0B4J2F2 783 aa22.46■■□□□ 1.19
CLTA-201ENST00000242285 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
CLTA-201ENST00000242285 SIK1P57059 783 aa22.46■■□□□ 1.19
CLTA-201ENST00000242285 ATG3Q9NT62 314 aa22.46■■□□□ 1.19
CLTA-201ENST00000242285 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
CLTA-201ENST00000242285 MSH5O43196 834 aa22.45■■□□□ 1.18
CLTA-201ENST00000242285 CABP4P57796 275 aa22.45■■□□□ 1.18
CLTA-201ENST00000242285 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
CLTA-201ENST00000242285 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
CLTA-201ENST00000242285 UBR2Q8IWV8 1755 aa22.44■■□□□ 1.18
CLTA-201ENST00000242285 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
CLTA-201ENST00000242285 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
CLTA-201ENST00000242285 RALBP1Q15311 655 aa22.43■■□□□ 1.18
CLTA-201ENST00000242285 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
CLTA-201ENST00000242285 AK7Q96M32 723 aa22.43■■□□□ 1.18
CLTA-201ENST00000242285 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
CLTA-201ENST00000242285 SSFA2P28290 1259 aa22.42■■□□□ 1.18
CLTA-201ENST00000242285 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
CLTA-201ENST00000242285 RSPH6AQ9H0K4 717 aa22.42■■□□□ 1.18
CLTA-201ENST00000242285 TJP1Q07157 1748 aa22.41■■□□□ 1.18
CLTA-201ENST00000242285 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
CLTA-201ENST00000242285 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
CLTA-201ENST00000242285 RNMTO43148 476 aaKnown RBP22.4■■□□□ 1.18
CLTA-201ENST00000242285 FCHSD2O94868 740 aa22.4■■□□□ 1.18
CLTA-201ENST00000242285 NFATC2IPQ8NCF5 419 aa22.4■■□□□ 1.18
CLTA-201ENST00000242285 SLC52A2Q9HAB3 445 aa22.4■■□□□ 1.18
CLTA-201ENST00000242285 ATP6V1AP38606 617 aa22.39■■□□□ 1.17
CLTA-201ENST00000242285 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
CLTA-201ENST00000242285 PRKAR2BP31323 418 aa22.37■■□□□ 1.17
CLTA-201ENST00000242285 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLTA-201ENST00000242285 ITPK1Q13572 414 aa22.37■■□□□ 1.17
CLTA-201ENST00000242285 LINC00116Q8NCU8 138 aa22.37■■□□□ 1.17
CLTA-201ENST00000242285 LGR6Q9HBX8 967 aa22.37■■□□□ 1.17
CLTA-201ENST00000242285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.36■■□□□ 1.17
CLTA-201ENST00000242285 GNAT3A8MTJ3 354 aa22.36■■□□□ 1.17
CLTA-201ENST00000242285 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
CLTA-201ENST00000242285 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
CLTA-201ENST00000242285 RC3H1Q5TC82 1133 aaKnown RBP22.35■■□□□ 1.17
CLTA-201ENST00000242285 SLC4A9Q96Q91 983 aa22.35■■□□□ 1.17
CLTA-201ENST00000242285 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
CLTA-201ENST00000242285 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLTA-201ENST00000242285 PHACTR3Q96KR7 559 aa22.34■■□□□ 1.17
CLTA-201ENST00000242285 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
CLTA-201ENST00000242285 CNTNAP4Q9C0A0 1308 aa22.33■■□□□ 1.17
CLTA-201ENST00000242285 KCPQ6ZWJ8 1503 aa22.33■■□□□ 1.17
CLTA-201ENST00000242285 C1QTNF8P60827 252 aa22.33■■□□□ 1.17
CLTA-201ENST00000242285 RBM42Q9BTD8 480 aaKnown RBP22.33■■□□□ 1.17
CLTA-201ENST00000242285 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
CLTA-201ENST00000242285 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
CLTA-201ENST00000242285 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
CLTA-201ENST00000242285 GNPATO15228 680 aa22.29■■□□□ 1.16
CLTA-201ENST00000242285 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
CLTA-201ENST00000242285 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
CLTA-201ENST00000242285 PHF14O94880 888 aa22.29■■□□□ 1.16
CLTA-201ENST00000242285 ADRA2BP18089 450 aa22.29■■□□□ 1.16
CLTA-201ENST00000242285 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
CLTA-201ENST00000242285 GIGYF1O75420 1035 aaPredicted RBP22.28■■□□□ 1.16
CLTA-201ENST00000242285 TEFQ10587 303 aa22.28■■□□□ 1.16
CLTA-201ENST00000242285 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
CLTA-201ENST00000242285 NEFMP07197 916 aa22.26■■□□□ 1.15
CLTA-201ENST00000242285 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
CLTA-201ENST00000242285 RPS6KA4O75676 772 aa22.25■■□□□ 1.15
CLTA-201ENST00000242285 PLEKHF1Q96S99 279 aa22.25■■□□□ 1.15
CLTA-201ENST00000242285 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
CLTA-201ENST00000242285 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
CLTA-201ENST00000242285 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
CLTA-201ENST00000242285 NLGN1Q8N2Q7 840 aa22.24■■□□□ 1.15
CLTA-201ENST00000242285 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
CLTA-201ENST00000242285 CRKLP46109 303 aaKnown RBP22.23■■□□□ 1.15
CLTA-201ENST00000242285 TTC5Q8N0Z6 440 aa22.23■■□□□ 1.15
CLTA-201ENST00000242285 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
CLTA-201ENST00000242285 ADCY9O60503 1353 aa22.23■■□□□ 1.15
CLTA-201ENST00000242285 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
CLTA-201ENST00000242285 ZNF790Q6PG37 636 aa22.22■■□□□ 1.15
CLTA-201ENST00000242285 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
CLTA-201ENST00000242285 TGFB2P61812 414 aa22.2■■□□□ 1.14
CLTA-201ENST00000242285 DNAJC10Q8IXB1 793 aa22.2■■□□□ 1.14
CLTA-201ENST00000242285 HEG1Q9ULI3 1381 aa22.2■■□□□ 1.14
CLTA-201ENST00000242285 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
CLTA-201ENST00000242285 MMP10P09238 476 aa22.19■■□□□ 1.14
CLTA-201ENST00000242285 CYP19A1P11511 503 aaPredicted RBP22.19■■□□□ 1.14
CLTA-201ENST00000242285 INTS5Q6P9B9 1019 aaKnown RBP22.19■■□□□ 1.14
CLTA-201ENST00000242285 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
CLTA-201ENST00000242285 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms