RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 STRN4Q9NRL3 753 aa28.78■■■□□ 2.2
RNF170-201ENST00000240159 PARP4Q9UKK3 1724 aaKnown RBP28.77■■■□□ 2.2
RNF170-201ENST00000240159 KCNQ3O43525 872 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 EVA1CP58658 441 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 SCN11AQ9UI33 1791 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 LARP1Q6PKG0 1096 aaKnown RBP28.77■■■□□ 2.2
RNF170-201ENST00000240159 SKAP1Q86WV1 359 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 STK31Q9BXU1 1019 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 PHLPP1O60346 1717 aa28.77■■■□□ 2.2
RNF170-201ENST00000240159 CYP27B1O15528 508 aa28.76■■■□□ 2.19
RNF170-201ENST00000240159 COL16A1Q07092 1604 aaPredicted RBP28.76■■■□□ 2.19
RNF170-201ENST00000240159 TOM1O60784 492 aa28.76■■■□□ 2.19
RNF170-201ENST00000240159 ZBTB7BO15156 539 aaPredicted RBP28.75■■■□□ 2.19
RNF170-201ENST00000240159 G2E3Q7L622 706 aa28.74■■■□□ 2.19
RNF170-201ENST00000240159 RWDD1Q9H446 243 aaPredicted RBP28.74■■■□□ 2.19
RNF170-201ENST00000240159 COL14A1Q05707 1796 aaKnown RBP28.74■■■□□ 2.19
RNF170-201ENST00000240159 HOXB7P09629 217 aa28.74■■■□□ 2.19
RNF170-201ENST00000240159 CHMP4BQ9H444 224 aaKnown RBP28.74■■■□□ 2.19
RNF170-201ENST00000240159 NECTIN2Q92692 538 aa28.73■■■□□ 2.19
RNF170-201ENST00000240159 INTS3Q68E01 1043 aaKnown RBP28.72■■■□□ 2.19
RNF170-201ENST00000240159 BTG4Q9NY30 223 aa28.72■■■□□ 2.19
RNF170-201ENST00000240159 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
RNF170-201ENST00000240159 SLC52A2Q9HAB3 445 aa28.72■■■□□ 2.19
RNF170-201ENST00000240159 HDGFL1Q5TGJ6 251 aa28.71■■■□□ 2.19
RNF170-201ENST00000240159 HSP90AB1P08238 724 aaKnown RBP28.7■■■□□ 2.19
RNF170-201ENST00000240159 IL2RBP14784 551 aa28.7■■■□□ 2.19
RNF170-201ENST00000240159 PIP4K2BP78356 416 aa28.7■■■□□ 2.19
RNF170-201ENST00000240159 ZCRB1Q8TBF4 217 aaKnown RBP28.7■■■□□ 2.18
RNF170-201ENST00000240159 MRC1P22897 1456 aa28.69■■■□□ 2.18
RNF170-201ENST00000240159 CACNA1FO60840 1977 aa28.69■■■□□ 2.18
RNF170-201ENST00000240159 RBM19Q9Y4C8 960 aaKnown RBP28.69■■■□□ 2.18
RNF170-201ENST00000240159 HDAC1Q13547 482 aaPredicted RBP28.69■■■□□ 2.18
RNF170-201ENST00000240159 HEG1Q9ULI3 1381 aa28.68■■■□□ 2.18
RNF170-201ENST00000240159 PCDH11XQ9BZA7 1347 aa28.68■■■□□ 2.18
RNF170-201ENST00000240159 PCDH11YQ9BZA8 1340 aa28.68■■■□□ 2.18
RNF170-201ENST00000240159 FLIIQ13045 1269 aa28.67■■■□□ 2.18
RNF170-201ENST00000240159 NFATC2IPQ8NCF5 419 aa28.67■■■□□ 2.18
RNF170-201ENST00000240159 CHMP4AQ9BY43 222 aa28.67■■■□□ 2.18
RNF170-201ENST00000240159 EIF2S2P20042 333 aaKnown RBP28.65■■■□□ 2.18
RNF170-201ENST00000240159 GIGYF1O75420 1035 aaPredicted RBP28.64■■■□□ 2.18
RNF170-201ENST00000240159 ZNF790Q6PG37 636 aa28.64■■■□□ 2.17
RNF170-201ENST00000240159 F6X3S4 739 aa28.63■■■□□ 2.17
RNF170-201ENST00000240159 SHANK3Q9BYB0 1731 aa28.63■■■□□ 2.17
RNF170-201ENST00000240159 UBAP1LF5GYI3 381 aa28.62■■■□□ 2.17
RNF170-201ENST00000240159 FKBP5Q13451 457 aaPredicted RBP28.62■■■□□ 2.17
RNF170-201ENST00000240159 USP35Q9P2H5 1018 aa28.62■■■□□ 2.17
RNF170-201ENST00000240159 SLC39A6Q13433 755 aa28.62■■■□□ 2.17
RNF170-201ENST00000240159 C1orf115Q9H7X2 142 aa28.62■■■□□ 2.17
RNF170-201ENST00000240159 CHPF2Q9P2E5 772 aa28.6■■■□□ 2.17
RNF170-201ENST00000240159 RGS3P49796 1198 aa28.59■■■□□ 2.17
RNF170-201ENST00000240159 CCT4P50991 539 aaKnown RBP28.59■■■□□ 2.17
RNF170-201ENST00000240159 CABP4P57796 275 aa28.59■■■□□ 2.17
RNF170-201ENST00000240159 NKX1-1Q15270 411 aaPredicted RBP28.59■■■□□ 2.17
RNF170-201ENST00000240159 SLC4A10Q6U841 1118 aa28.59■■■□□ 2.17
RNF170-201ENST00000240159 PHAXQ9H814 394 aaKnown RBP28.59■■■□□ 2.17
RNF170-201ENST00000240159 PRAMEF22A3QJZ6 481 aa28.57■■■□□ 2.16
RNF170-201ENST00000240159 ADAMTS2O95450 1211 aa28.57■■■□□ 2.16
RNF170-201ENST00000240159 PDZRN3Q9UPQ7 1066 aa28.57■■■□□ 2.16
RNF170-201ENST00000240159 PLCH1Q4KWH8 1693 aa28.57■■■□□ 2.16
RNF170-201ENST00000240159 DDX54Q8TDD1 881 aaKnown RBP28.57■■■□□ 2.16
RNF170-201ENST00000240159 SMC5Q8IY18 1101 aa28.56■■■□□ 2.16
RNF170-201ENST00000240159 DBF4Q9UBU7 674 aaPredicted RBP28.55■■■□□ 2.16
RNF170-201ENST00000240159 DISP2A7MBM2 1401 aa28.55■■■□□ 2.16
RNF170-201ENST00000240159 ERVV-2B6SEH9 535 aa28.54■■■□□ 2.16
RNF170-201ENST00000240159 PXDNLA1KZ92 1463 aa28.54■■■□□ 2.16
RNF170-201ENST00000240159 SIRT2Q8IXJ6 389 aa28.53■■■□□ 2.16
RNF170-201ENST00000240159 TTC5Q8N0Z6 440 aa28.53■■■□□ 2.16
RNF170-201ENST00000240159 ZNF496Q96IT1 587 aaPredicted RBP28.53■■■□□ 2.16
RNF170-201ENST00000240159 MEIS3Q99687 375 aa28.53■■■□□ 2.16
RNF170-201ENST00000240159 C5P01031 1676 aa28.53■■■□□ 2.16
RNF170-201ENST00000240159 N4BP2Q86UW6 1770 aaPredicted RBP28.52■■■□□ 2.16
RNF170-201ENST00000240159 NUTM2BA6NNL0 878 aaPredicted RBP28.52■■■□□ 2.16
RNF170-201ENST00000240159 NUTM2EB1AL46 878 aaPredicted RBP28.52■■■□□ 2.16
RNF170-201ENST00000240159 PDE4AP27815 886 aa28.52■■■□□ 2.16
RNF170-201ENST00000240159 NUTM2AQ8IVF1 878 aaPredicted RBP28.52■■■□□ 2.16
RNF170-201ENST00000240159 ANXA1P04083 346 aa28.52■■■□□ 2.16
RNF170-201ENST00000240159 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
RNF170-201ENST00000240159 NRAPQ86VF7 1730 aa28.51■■■□□ 2.15
RNF170-201ENST00000240159 ATP10DQ9P241 1426 aa28.49■■■□□ 2.15
RNF170-201ENST00000240159 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
RNF170-201ENST00000240159 FMNL2Q96PY5 1086 aa28.49■■■□□ 2.15
RNF170-201ENST00000240159 BACH2Q9BYV9 841 aa28.49■■■□□ 2.15
RNF170-201ENST00000240159 SNRPA1P09661 255 aaKnown RBP28.47■■■□□ 2.15
RNF170-201ENST00000240159 DDX21Q9NR30 783 aaKnown RBP eCLIP28.47■■■□□ 2.15
RNF170-201ENST00000240159 HYPKQ9NX55 129 aa28.47■■■□□ 2.15
RNF170-201ENST00000240159 WNK3Q9BYP7 1800 aa28.46■■■□□ 2.15
RNF170-201ENST00000240159 TOGARAM1Q9Y4F4 1720 aa28.46■■■□□ 2.15
RNF170-201ENST00000240159 ANKRD44Q8N8A2 993 aa28.46■■■□□ 2.15
RNF170-201ENST00000240159 GCC1Q96CN9 775 aa28.46■■■□□ 2.15
RNF170-201ENST00000240159 GLI3P10071 1580 aa28.46■■■□□ 2.15
RNF170-201ENST00000240159 PDIA6Q15084 440 aa28.45■■■□□ 2.15
RNF170-201ENST00000240159 RPAP2Q8IXW5 612 aaPredicted RBP28.45■■■□□ 2.15
RNF170-201ENST00000240159 PI4KAP2A4QPH2 592 aa28.45■■■□□ 2.14
RNF170-201ENST00000240159 CEP85Q6P2H3 762 aa28.45■■■□□ 2.14
RNF170-201ENST00000240159 PI4KAP1Q8N8J0 262 aa28.45■■■□□ 2.14
RNF170-201ENST00000240159 PAPPAQ13219 1627 aa28.45■■■□□ 2.14
RNF170-201ENST00000240159 ADCY9O60503 1353 aa28.44■■■□□ 2.14
RNF170-201ENST00000240159 DNAAF4Q8WXU2 420 aa28.44■■■□□ 2.14
RNF170-201ENST00000240159 NWD2Q9ULI1 1742 aa28.43■■■□□ 2.14
RNF170-201ENST00000240159 NUCB1Q02818 461 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms