RNA–Protein interactions for RNA: ENST00000237724.9

RAB3GAP2-201, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 3

Gene RAB3GAP2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-201ENST00000237724 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
RAB3GAP2-201ENST00000237724 NMRK2Q9NPI5 230 aa21.53■■□□□ 1.04
RAB3GAP2-201ENST00000237724 BRCA1P38398 1863 aaKnown RBP21.51■■□□□ 1.03
RAB3GAP2-201ENST00000237724 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
RAB3GAP2-201ENST00000237724 TGFB2P61812 414 aa21.5■■□□□ 1.03
RAB3GAP2-201ENST00000237724 FCHSD2O94868 740 aa21.49■■□□□ 1.03
RAB3GAP2-201ENST00000237724 TMF1P82094 1093 aa21.49■■□□□ 1.03
RAB3GAP2-201ENST00000237724 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
RAB3GAP2-201ENST00000237724 DPEP1P16444 411 aa21.48■■□□□ 1.03
RAB3GAP2-201ENST00000237724 HTRA3P83110 453 aa21.48■■□□□ 1.03
RAB3GAP2-201ENST00000237724 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
RAB3GAP2-201ENST00000237724 RTCBQ9Y3I0 505 aaKnown RBP21.48■■□□□ 1.03
RAB3GAP2-201ENST00000237724 C16orf71Q8IYS4 520 aaPredicted RBP21.47■■□□□ 1.03
RAB3GAP2-201ENST00000237724 ARFGEF1Q9Y6D6 1849 aa21.47■■□□□ 1.03
RAB3GAP2-201ENST00000237724 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
RAB3GAP2-201ENST00000237724 IFNL2Q8IZJ0 200 aa21.46■■□□□ 1.03
RAB3GAP2-201ENST00000237724 NLGN1Q8N2Q7 840 aa21.46■■□□□ 1.03
RAB3GAP2-201ENST00000237724 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
RAB3GAP2-201ENST00000237724 PHKG2P15735 406 aa21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 C9orf131Q5VYM1 1079 aa21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 EYA1Q99502 592 aa21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 NCAPD2Q15021 1401 aa21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 C10orf71Q711Q0 1435 aa21.45■■□□□ 1.02
RAB3GAP2-201ENST00000237724 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
RAB3GAP2-201ENST00000237724 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
RAB3GAP2-201ENST00000237724 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
RAB3GAP2-201ENST00000237724 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 CAPN15O75808 1086 aa21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 COL13A1Q5TAT6 717 aaPredicted RBP21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 PCNTO95613 3336 aa21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
RAB3GAP2-201ENST00000237724 SBF1O95248 1867 aa21.42■■□□□ 1.02
RAB3GAP2-201ENST00000237724 RFC4P35249 363 aa21.42■■□□□ 1.02
RAB3GAP2-201ENST00000237724 KLRG1Q96E93 195 aa21.42■■□□□ 1.02
RAB3GAP2-201ENST00000237724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.026e-7■■■■□ 19.6
RAB3GAP2-201ENST00000237724 GYS1P13807 737 aa21.41■■□□□ 1.02
RAB3GAP2-201ENST00000237724 SLC4A9Q96Q91 983 aa21.41■■□□□ 1.02
RAB3GAP2-201ENST00000237724 CARD14Q9BXL6 1004 aa21.41■■□□□ 1.02
RAB3GAP2-201ENST00000237724 KCPQ6ZWJ8 1503 aa21.39■■□□□ 1.02
RAB3GAP2-201ENST00000237724 KDRP35968 1356 aa21.39■■□□□ 1.02
RAB3GAP2-201ENST00000237724 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
RAB3GAP2-201ENST00000237724 KCNA3P22001 575 aa21.39■■□□□ 1.01
RAB3GAP2-201ENST00000237724 PLEKHG2Q9H7P9 1386 aa21.38■■□□□ 1.01
RAB3GAP2-201ENST00000237724 ZNF831Q5JPB2 1677 aa21.38■■□□□ 1.01
RAB3GAP2-201ENST00000237724 ADRA2BP18089 450 aa21.38■■□□□ 1.01
RAB3GAP2-201ENST00000237724 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
RAB3GAP2-201ENST00000237724 PIM2Q9P1W9 311 aa21.38■■□□□ 1.01
RAB3GAP2-201ENST00000237724 RPS6KA4O75676 772 aa21.37■■□□□ 1.01
RAB3GAP2-201ENST00000237724 FSTL1Q12841 308 aa21.37■■□□□ 1.01
RAB3GAP2-201ENST00000237724 CDCA8Q53HL2 280 aa21.37■■□□□ 1.01
RAB3GAP2-201ENST00000237724 RC3H1Q5TC82 1133 aaKnown RBP21.37■■□□□ 1.01
RAB3GAP2-201ENST00000237724 RNF181Q9P0P0 153 aa21.37■■□□□ 1.01
RAB3GAP2-201ENST00000237724 KDM2BQ8NHM5 1336 aa21.36■■□□□ 1.01
RAB3GAP2-201ENST00000237724 JMYQ8N9B5 988 aa21.36■■□□□ 1.01
RAB3GAP2-201ENST00000237724 CNTNAP4Q9C0A0 1308 aa21.35■■□□□ 1.01
RAB3GAP2-201ENST00000237724 TNRC6CQ9HCJ0 1690 aaKnown RBP21.35■■□□□ 1.01
RAB3GAP2-201ENST00000237724 DALRD3Q5D0E6 543 aaKnown RBP21.35■■□□□ 1.01
RAB3GAP2-201ENST00000237724 ERVV-2B6SEH9 535 aa21.34■■□□□ 1.01
RAB3GAP2-201ENST00000237724 POLKQ9UBT6 870 aa21.34■■□□□ 1.01
RAB3GAP2-201ENST00000237724 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
RAB3GAP2-201ENST00000237724 CCDC88AQ3V6T2 1871 aa21.34■■□□□ 1.01
RAB3GAP2-201ENST00000237724 TNNT2P45379 298 aaPredicted RBP21.33■■□□□ 1.01
RAB3GAP2-201ENST00000237724 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
RAB3GAP2-201ENST00000237724 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
RAB3GAP2-201ENST00000237724 DCAF5Q96JK2 942 aa21.33■■□□□ 1.01
RAB3GAP2-201ENST00000237724 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
RAB3GAP2-201ENST00000237724 CHRNA5P30532 468 aa21.32■■□□□ 1
RAB3GAP2-201ENST00000237724 CABP4P57796 275 aa21.31■■□□□ 1
RAB3GAP2-201ENST00000237724 FKBP8Q14318 412 aa21.31■■□□□ 1
RAB3GAP2-201ENST00000237724 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
RAB3GAP2-201ENST00000237724 CRKLP46109 303 aaKnown RBP21.29■■□□□ 1
RAB3GAP2-201ENST00000237724 DDR1Q08345 913 aa21.29■■□□□ 1
RAB3GAP2-201ENST00000237724 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
RAB3GAP2-201ENST00000237724 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
RAB3GAP2-201ENST00000237724 SMC1BQ8NDV3 1235 aa21.28■■□□□ 1
RAB3GAP2-201ENST00000237724 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
RAB3GAP2-201ENST00000237724 AFDNP55196 1824 aaKnown RBP21.27■□□□□ 0.99
RAB3GAP2-201ENST00000237724 TJP1Q07157 1748 aa21.26■□□□□ 0.99
RAB3GAP2-201ENST00000237724 RASSF7Q02833 373 aa21.26■□□□□ 0.99
RAB3GAP2-201ENST00000237724 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
RAB3GAP2-201ENST00000237724 PRELPP51888 382 aa21.25■□□□□ 0.99
RAB3GAP2-201ENST00000237724 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
RAB3GAP2-201ENST00000237724 MTHFSP49914 203 aa21.24■□□□□ 0.99
RAB3GAP2-201ENST00000237724 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
RAB3GAP2-201ENST00000237724 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
RAB3GAP2-201ENST00000237724 HSPA1AP0DMV8 641 aaKnown RBP21.22■□□□□ 0.99
RAB3GAP2-201ENST00000237724 HSPA1BP0DMV9 641 aaKnown RBP21.22■□□□□ 0.99
RAB3GAP2-201ENST00000237724 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
RAB3GAP2-201ENST00000237724 ZPR1O75312 459 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 TM4SF1P30408 202 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 AMOTQ4VCS5 1084 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 USPL1Q5W0Q7 1092 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 TIAM2Q8IVF5 1701 aa21.21■□□□□ 0.99
RAB3GAP2-201ENST00000237724 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.99
RAB3GAP2-201ENST00000237724 VIRMAQ69YN4 1812 aaKnown RBP21.2■□□□□ 0.98
RAB3GAP2-201ENST00000237724 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
RAB3GAP2-201ENST00000237724 GLTPD2A6NH11 291 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms