RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NGLY1Q96IV0 654 aa23.89■■□□□ 1.41
SNX17-201ENST00000233575 DCAF5Q96JK2 942 aa23.89■■□□□ 1.41
SNX17-201ENST00000233575 PANK1Q8TE04 598 aa23.88■■□□□ 1.41
SNX17-201ENST00000233575 NOB1Q9ULX3 412 aaKnown RBP23.88■■□□□ 1.41
SNX17-201ENST00000233575 MRPL50Q8N5N7 158 aaKnown RBP23.87■■□□□ 1.41
SNX17-201ENST00000233575 PPP4R2Q9NY27 417 aa23.87■■□□□ 1.41
SNX17-201ENST00000233575 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
SNX17-201ENST00000233575 NFATC2IPQ8NCF5 419 aa23.86■■□□□ 1.41
SNX17-201ENST00000233575 SLC52A2Q9HAB3 445 aa23.86■■□□□ 1.41
SNX17-201ENST00000233575 RLBP1P12271 317 aa23.86■■□□□ 1.41
SNX17-201ENST00000233575 CLUAP1Q96AJ1 413 aa23.86■■□□□ 1.41
SNX17-201ENST00000233575 SPATA31A5Q5VU36 1347 aa23.85■■□□□ 1.41
SNX17-201ENST00000233575 SPATA31A7Q8IWB4 1347 aa23.85■■□□□ 1.41
SNX17-201ENST00000233575 HSP90AB1P08238 724 aaKnown RBP23.85■■□□□ 1.41
SNX17-201ENST00000233575 UNC5CLQ8IV45 518 aa23.85■■□□□ 1.41
SNX17-201ENST00000233575 MRC1P22897 1456 aa23.85■■□□□ 1.41
SNX17-201ENST00000233575 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
SNX17-201ENST00000233575 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
SNX17-201ENST00000233575 B4GALNT3Q6L9W6 998 aa23.84■■□□□ 1.41
SNX17-201ENST00000233575 CCDC9Q9Y3X0 531 aaKnown RBP23.84■■□□□ 1.41
SNX17-201ENST00000233575 PDE3AQ14432 1141 aa23.84■■□□□ 1.41
SNX17-201ENST00000233575 TRIM27P14373 513 aa23.83■■□□□ 1.41
SNX17-201ENST00000233575 BRPF1P55201 1214 aaPredicted RBP23.83■■□□□ 1.4
SNX17-201ENST00000233575 NKX1-1Q15270 411 aaPredicted RBP23.83■■□□□ 1.4
SNX17-201ENST00000233575 FNBP4Q8N3X1 1017 aaPredicted RBP23.83■■□□□ 1.4
SNX17-201ENST00000233575 KIF16BQ96L93 1317 aa23.82■■□□□ 1.4
SNX17-201ENST00000233575 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
SNX17-201ENST00000233575 COG6Q9Y2V7 657 aa23.82■■□□□ 1.4
SNX17-201ENST00000233575 TOGARAM1Q9Y4F4 1720 aa23.81■■□□□ 1.4
SNX17-201ENST00000233575 ATF7IPQ6VMQ6 1270 aa23.81■■□□□ 1.4
SNX17-201ENST00000233575 NECTIN2Q92692 538 aa23.81■■□□□ 1.4
SNX17-201ENST00000233575 THRAP3Q9Y2W1 955 aaKnown RBP23.8■■□□□ 1.4
SNX17-201ENST00000233575 CABP4P57796 275 aa23.79■■□□□ 1.4
SNX17-201ENST00000233575 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
SNX17-201ENST00000233575 EXOC5O00471 708 aa23.78■■□□□ 1.4
SNX17-201ENST00000233575 USP21Q9UK80 565 aa23.78■■□□□ 1.4
SNX17-201ENST00000233575 TNS2Q63HR2 1409 aa23.78■■□□□ 1.4
SNX17-201ENST00000233575 ZNF790Q6PG37 636 aa23.77■■□□□ 1.4
SNX17-201ENST00000233575 DZIP1LQ8IYY4 767 aaKnown RBP23.77■■□□□ 1.4
SNX17-201ENST00000233575 VPS72Q15906 364 aa23.77■■□□□ 1.4
SNX17-201ENST00000233575 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
SNX17-201ENST00000233575 SLC4A2P04920 1241 aa23.76■■□□□ 1.39
SNX17-201ENST00000233575 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
SNX17-201ENST00000233575 HEG1Q9ULI3 1381 aa23.76■■□□□ 1.39
SNX17-201ENST00000233575 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
SNX17-201ENST00000233575 BARGINQ6ZT62 677 aa23.76■■□□□ 1.39
SNX17-201ENST00000233575 ERVV-2B6SEH9 535 aa23.75■■□□□ 1.39
SNX17-201ENST00000233575 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
SNX17-201ENST00000233575 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.75■■□□□ 1.39
SNX17-201ENST00000233575 FAM98CQ17RN3 349 aaKnown RBP23.74■■□□□ 1.39
SNX17-201ENST00000233575 SOS1Q07889 1333 aaPredicted RBP23.74■■□□□ 1.39
SNX17-201ENST00000233575 GIGYF1O75420 1035 aaPredicted RBP23.74■■□□□ 1.39
SNX17-201ENST00000233575 EIF2S2P20042 333 aaKnown RBP23.74■■□□□ 1.39
SNX17-201ENST00000233575 DDB1Q16531 1140 aa23.74■■□□□ 1.39
SNX17-201ENST00000233575 HDGFL1Q5TGJ6 251 aa23.74■■□□□ 1.39
SNX17-201ENST00000233575 G2E3Q7L622 706 aa23.74■■□□□ 1.39
SNX17-201ENST00000233575 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
SNX17-201ENST00000233575 CCDC30Q5VVM6 783 aa23.73■■□□□ 1.39
SNX17-201ENST00000233575 AFF2P51816 1311 aa23.73■■□□□ 1.39
SNX17-201ENST00000233575 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
SNX17-201ENST00000233575 ARHGAP45Q92619 1136 aa23.72■■□□□ 1.39
SNX17-201ENST00000233575 ZNF496Q96IT1 587 aaPredicted RBP23.72■■□□□ 1.39
SNX17-201ENST00000233575 C5P01031 1676 aa23.72■■□□□ 1.39
SNX17-201ENST00000233575 HOXB7P09629 217 aa23.71■■□□□ 1.39
SNX17-201ENST00000233575 MVPQ14764 893 aaKnown RBP23.71■■□□□ 1.39
SNX17-201ENST00000233575 STK31Q9BXU1 1019 aa23.71■■□□□ 1.39
SNX17-201ENST00000233575 RGS12O14924 1447 aa23.71■■□□□ 1.39
SNX17-201ENST00000233575 ITGB4P16144 1822 aa23.7■■□□□ 1.38
SNX17-201ENST00000233575 MS4A1P11836 297 aa23.7■■□□□ 1.38
SNX17-201ENST00000233575 TTC5Q8N0Z6 440 aa23.7■■□□□ 1.38
SNX17-201ENST00000233575 GLI3P10071 1580 aa23.7■■□□□ 1.38
SNX17-201ENST00000233575 PAPPAQ13219 1627 aa23.69■■□□□ 1.38
SNX17-201ENST00000233575 ITPRIPQ8IWB1 547 aa23.69■■□□□ 1.38
SNX17-201ENST00000233575 MARCH10Q8NA82 808 aaPredicted RBP23.69■■□□□ 1.38
SNX17-201ENST00000233575 ABCC4O15439 1325 aa23.68■■□□□ 1.38
SNX17-201ENST00000233575 CHPF2Q9P2E5 772 aa23.68■■□□□ 1.38
SNX17-201ENST00000233575 TMOD3Q9NYL9 352 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 KAT6BQ8WYB5 2073 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 UBR2Q8IWV8 1755 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 ANXA1P04083 346 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 PIGBQ92521 554 aa23.67■■□□□ 1.38
SNX17-201ENST00000233575 API5Q9BZZ5 524 aaKnown RBP23.67■■□□□ 1.38
SNX17-201ENST00000233575 CACNA1FO60840 1977 aa23.66■■□□□ 1.38
SNX17-201ENST00000233575 PTPRCP08575 1304 aa23.66■■□□□ 1.38
SNX17-201ENST00000233575 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
SNX17-201ENST00000233575 KCPQ6ZWJ8 1503 aa23.65■■□□□ 1.38
SNX17-201ENST00000233575 FLIIQ13045 1269 aa23.65■■□□□ 1.38
SNX17-201ENST00000233575 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
SNX17-201ENST00000233575 PROSER3Q2NL68 480 aa23.64■■□□□ 1.37
SNX17-201ENST00000233575 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
SNX17-201ENST00000233575 A0A0G2JS52 829 aa23.63■■□□□ 1.37
SNX17-201ENST00000233575 F6X3S4 739 aa23.63■■□□□ 1.37
SNX17-201ENST00000233575 MYT1Q01538 1121 aa23.63■■□□□ 1.37
SNX17-201ENST00000233575 SYTL4Q96C24 671 aaPredicted RBP23.63■■□□□ 1.37
SNX17-201ENST00000233575 ASAP1Q9ULH1 1129 aa23.63■■□□□ 1.37
SNX17-201ENST00000233575 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
SNX17-201ENST00000233575 DDX19BQ9UMR2 479 aa23.62■■□□□ 1.37
SNX17-201ENST00000233575 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
SNX17-201ENST00000233575 THSD7AQ9UPZ6 1657 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms