RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
MSH2-201ENST00000233146 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
MSH2-201ENST00000233146 NRBP1Q9UHY1 535 aa15.49■□□□□ 0.07
MSH2-201ENST00000233146 WDR62O43379 1518 aa15.49■□□□□ 0.07
MSH2-201ENST00000233146 GIMAP6Q6P9H5 292 aa15.49■□□□□ 0.07
MSH2-201ENST00000233146 MED4Q9NPJ6 270 aa15.49■□□□□ 0.07
MSH2-201ENST00000233146 INTS3Q68E01 1043 aaKnown RBP15.48■□□□□ 0.07
MSH2-201ENST00000233146 UBE2HP62256 183 aa15.48■□□□□ 0.07
MSH2-201ENST00000233146 FOXD4L6Q3SYB3 417 aaPredicted RBP15.48■□□□□ 0.07
MSH2-201ENST00000233146 FOXD4L3Q6VB84 417 aaPredicted RBP15.48■□□□□ 0.07
MSH2-201ENST00000233146 SUGP1Q8IWZ8 645 aaKnown RBP15.48■□□□□ 0.07
MSH2-201ENST00000233146 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
MSH2-201ENST00000233146 SUFUQ9UMX1 484 aa15.48■□□□□ 0.07
MSH2-201ENST00000233146 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
MSH2-201ENST00000233146 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
MSH2-201ENST00000233146 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
MSH2-201ENST00000233146 PTPN14Q15678 1187 aa15.47■□□□□ 0.07
MSH2-201ENST00000233146 MNS1Q8NEH6 495 aa15.47■□□□□ 0.07
MSH2-201ENST00000233146 CACTINQ8WUQ7 758 aaKnown RBP15.47■□□□□ 0.07
MSH2-201ENST00000233146 MCM2P49736 904 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 ERCC6LQ2NKX8 1250 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 TMED8Q6PL24 325 aaPredicted RBP15.46■□□□□ 0.07
MSH2-201ENST00000233146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
MSH2-201ENST00000233146 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 REXO1L1PQ8IX06 675 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 PSD3Q9NYI0 1048 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.07
MSH2-201ENST00000233146 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.06
MSH2-201ENST00000233146 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
MSH2-201ENST00000233146 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 WDR33Q9C0J8 1336 aaKnown RBP15.45■□□□□ 0.06
MSH2-201ENST00000233146 CCDC189A1A4V9 331 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 NPHP1O15259 732 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
MSH2-201ENST00000233146 TTC22Q5TAA0 569 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 USP27XA6NNY8 438 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 NBPF20Q3BBV1 942 aa15.45■□□□□ 0.06
MSH2-201ENST00000233146 PPRC1Q5VV67 1664 aaKnown RBP15.44■□□□□ 0.06
MSH2-201ENST00000233146 MED14O60244 1454 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 CCDC192P0DO97 292 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 DNAJC21Q5F1R6 531 aaKnown RBP15.44■□□□□ 0.06
MSH2-201ENST00000233146 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 ATP8B1O43520 1251 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 NEK4P51957 841 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
MSH2-201ENST00000233146 L2HGDHQ9H9P8 463 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 ATAD2Q6PL18 1390 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
MSH2-201ENST00000233146 IPO8O15397 1037 aaKnown RBP15.43■□□□□ 0.06
MSH2-201ENST00000233146 ZNF75DP51815 510 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 E2F4Q16254 413 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 MCTP2Q6DN12 878 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 ZCCHC17Q9NP64 241 aaKnown RBP15.43■□□□□ 0.06
MSH2-201ENST00000233146 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 TDO2P48775 406 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 EXOC4Q96A65 974 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 AK7Q96M32 723 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
MSH2-201ENST00000233146 ACTN2P35609 894 aa15.42■□□□□ 0.06
MSH2-201ENST00000233146 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
MSH2-201ENST00000233146 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
MSH2-201ENST00000233146 CEP89Q96ST8 783 aa15.42■□□□□ 0.06
MSH2-201ENST00000233146 ELP1O95163 1332 aa15.42■□□□□ 0.06
MSH2-201ENST00000233146 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
MSH2-201ENST00000233146 OAS2P29728 719 aaKnown RBP15.42■□□□□ 0.06
MSH2-201ENST00000233146 CFDP1Q9UEE9 299 aaPredicted RBP15.42■□□□□ 0.06
MSH2-201ENST00000233146 FANCD2Q9BXW9 1451 aa15.41■□□□□ 0.06
MSH2-201ENST00000233146 PPM1EQ8WY54 764 aa15.41■□□□□ 0.06
MSH2-201ENST00000233146 RAI14Q9P0K7 980 aa15.41■□□□□ 0.06
MSH2-201ENST00000233146 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 KCND1Q9NSA2 647 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 ABCC11Q96J66 1382 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 EIF3CLB5ME19 914 aaKnown RBP15.4■□□□□ 0.06
MSH2-201ENST00000233146 IVLP07476 585 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 FILIP1Q7Z7B0 1213 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 LUZP1Q86V48 1076 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 LRRC8AQ8IWT6 810 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
MSH2-201ENST00000233146 ARGLU1Q9NWB6 273 aaPredicted RBP15.4■□□□□ 0.06
MSH2-201ENST00000233146 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
MSH2-201ENST00000233146 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
MSH2-201ENST00000233146 RTL1A6NKG5 1358 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 NEMFO60524 1076 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 CPP00450 1065 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 LRRN4CLQ8ND94 238 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 TRIM5Q9C035 493 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 RNF217Q8TC41 542 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
MSH2-201ENST00000233146 CEP152O94986 1710 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms