RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 KDM6AO15550 1401 aaPredicted RBP14.18□□□□□ -0.14
RPS13-201ENST00000228140 PER1O15534 1290 aaPredicted RBP14.18□□□□□ -0.14
RPS13-201ENST00000228140 SSFA2P28290 1259 aa14.18□□□□□ -0.14
RPS13-201ENST00000228140 ATP6V1AP38606 617 aa14.18□□□□□ -0.14
RPS13-201ENST00000228140 MTHFSP49914 203 aa14.17□□□□□ -0.14
RPS13-201ENST00000228140 CC2D1BQ5T0F9 858 aaKnown RBP14.17□□□□□ -0.14
RPS13-201ENST00000228140 AEBP1Q8IUX7 1158 aa14.17□□□□□ -0.14
RPS13-201ENST00000228140 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
RPS13-201ENST00000228140 CABP4P57796 275 aa14.16□□□□□ -0.14
RPS13-201ENST00000228140 ATG3Q9NT62 314 aa14.16□□□□□ -0.14
RPS13-201ENST00000228140 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
RPS13-201ENST00000228140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
RPS13-201ENST00000228140 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
RPS13-201ENST00000228140 C4AP0C0L4 1744 aa14.15□□□□□ -0.14
RPS13-201ENST00000228140 TJP1Q07157 1748 aa14.15□□□□□ -0.14
RPS13-201ENST00000228140 MRC1P22897 1456 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 GNPATO15228 680 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 PHF14O94880 888 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 GPR162Q16538 588 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 LINC00116Q8NCU8 138 aa14.14□□□□□ -0.15
RPS13-201ENST00000228140 COL3A1P02461 1466 aaPredicted RBP14.13□□□□□ -0.15
RPS13-201ENST00000228140 ITPK1Q13572 414 aa14.13□□□□□ -0.15
RPS13-201ENST00000228140 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
RPS13-201ENST00000228140 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
RPS13-201ENST00000228140 CNTNAP4Q9C0A0 1308 aa14.12□□□□□ -0.15
RPS13-201ENST00000228140 KIF13BQ9NQT8 1826 aa14.11□□□□□ -0.15
RPS13-201ENST00000228140 MYH14Q7Z406 1995 aaKnown RBP14.11□□□□□ -0.15
RPS13-201ENST00000228140 HMOX1P09601 288 aa14.11□□□□□ -0.15
RPS13-201ENST00000228140 ADRA2BP18089 450 aa14.11□□□□□ -0.15
RPS13-201ENST00000228140 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
RPS13-201ENST00000228140 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
RPS13-201ENST00000228140 UBR2Q8IWV8 1755 aa14.11□□□□□ -0.15
RPS13-201ENST00000228140 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
RPS13-201ENST00000228140 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
RPS13-201ENST00000228140 NFATC2IPQ8NCF5 419 aa14.1□□□□□ -0.15
RPS13-201ENST00000228140 SIPA1L3O60292 1781 aaPredicted RBP14.09□□□□□ -0.15
RPS13-201ENST00000228140 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
RPS13-201ENST00000228140 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
RPS13-201ENST00000228140 NLGN2Q8NFZ4 835 aa14.09□□□□□ -0.15
RPS13-201ENST00000228140 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
RPS13-201ENST00000228140 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
RPS13-201ENST00000228140 AMIGO3Q86WK7 504 aa14.08□□□□□ -0.16
RPS13-201ENST00000228140 SLC52A2Q9HAB3 445 aa14.08□□□□□ -0.16
RPS13-201ENST00000228140 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
RPS13-201ENST00000228140 NLGN1Q8N2Q7 840 aa14.07□□□□□ -0.16
RPS13-201ENST00000228140 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
RPS13-201ENST00000228140 RNMTO43148 476 aaKnown RBP14.06□□□□□ -0.16
RPS13-201ENST00000228140 RPS6KA4O75676 772 aa14.06□□□□□ -0.16
RPS13-201ENST00000228140 RFC4P35249 363 aa14.06□□□□□ -0.16
RPS13-201ENST00000228140 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
RPS13-201ENST00000228140 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
RPS13-201ENST00000228140 NUDCQ9Y266 331 aa14.05□□□□□ -0.16
RPS13-201ENST00000228140 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
RPS13-201ENST00000228140 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
RPS13-201ENST00000228140 MMP10P09238 476 aa14.04□□□□□ -0.16
RPS13-201ENST00000228140 SMIM5Q71RC9 77 aa14.04□□□□□ -0.16
RPS13-201ENST00000228140 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
RPS13-201ENST00000228140 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
RPS13-201ENST00000228140 UTRNP46939 3433 aa14.03□□□□□ -0.16
RPS13-201ENST00000228140 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
RPS13-201ENST00000228140 ZNF784Q8NCA9 323 aaPredicted RBP14.03□□□□□ -0.16
RPS13-201ENST00000228140 LGR6Q9HBX8 967 aa14.03□□□□□ -0.16
RPS13-201ENST00000228140 BRCA1P38398 1863 aaKnown RBP14.03□□□□□ -0.16
RPS13-201ENST00000228140 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
RPS13-201ENST00000228140 YBX3P16989 372 aaKnown RBP eCLIP14.02□□□□□ -0.173e-51■■□□□ 11.5
RPS13-201ENST00000228140 TEFQ10587 303 aa14.02□□□□□ -0.17
RPS13-201ENST00000228140 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
RPS13-201ENST00000228140 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
RPS13-201ENST00000228140 C10orf71Q711Q0 1435 aa14.01□□□□□ -0.17
RPS13-201ENST00000228140 GYS1P13807 737 aa14.01□□□□□ -0.17
RPS13-201ENST00000228140 PPP2R1AP30153 589 aa14.01□□□□□ -0.17
RPS13-201ENST00000228140 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
RPS13-201ENST00000228140 PARP3Q9Y6F1 533 aa14.01□□□□□ -0.17
RPS13-201ENST00000228140 USP42Q9H9J4 1324 aaKnown RBP14□□□□□ -0.17
RPS13-201ENST00000228140 ARFGEF1Q9Y6D6 1849 aa14□□□□□ -0.17
RPS13-201ENST00000228140 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
RPS13-201ENST00000228140 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
RPS13-201ENST00000228140 TGFB2P61812 414 aa13.99□□□□□ -0.17
RPS13-201ENST00000228140 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
RPS13-201ENST00000228140 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
RPS13-201ENST00000228140 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
RPS13-201ENST00000228140 COL15A1P39059 1388 aa13.98□□□□□ -0.17
RPS13-201ENST00000228140 ZPR1O75312 459 aa13.98□□□□□ -0.17
RPS13-201ENST00000228140 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
RPS13-201ENST00000228140 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.179e-9■■■■■ 30
RPS13-201ENST00000228140 INTS5Q6P9B9 1019 aaKnown RBP13.98□□□□□ -0.17
RPS13-201ENST00000228140 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
RPS13-201ENST00000228140 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
RPS13-201ENST00000228140 SCN7AQ01118 1682 aa13.98□□□□□ -0.17
RPS13-201ENST00000228140 CEMIPQ8WUJ3 1361 aa13.97□□□□□ -0.17
RPS13-201ENST00000228140 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
RPS13-201ENST00000228140 FCHSD2O94868 740 aa13.97□□□□□ -0.17
RPS13-201ENST00000228140 STARD3NLO95772 234 aa13.97□□□□□ -0.17
RPS13-201ENST00000228140 NEFMP07197 916 aa13.97□□□□□ -0.17
RPS13-201ENST00000228140 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
RPS13-201ENST00000228140 TEX13AQ9BXU3 409 aaPredicted RBP13.97□□□□□ -0.17
RPS13-201ENST00000228140 NRXN2Q9P2S2 1712 aa13.96□□□□□ -0.17
RPS13-201ENST00000228140 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms