RNA–Protein interactions for RNA: ENST00000227163.8

SPI1-201, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPI1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-201ENST00000227163 ZNF530Q6P9A1 599 aaPredicted RBP29.24■■■□□ 2.27
SPI1-201ENST00000227163 AMIGO3Q86WK7 504 aa29.24■■■□□ 2.27
SPI1-201ENST00000227163 DCAF5Q96JK2 942 aa29.23■■■□□ 2.27
SPI1-201ENST00000227163 ITPK1Q13572 414 aa29.22■■■□□ 2.27
SPI1-201ENST00000227163 AMOTQ4VCS5 1084 aa29.22■■■□□ 2.27
SPI1-201ENST00000227163 ATG3Q9NT62 314 aa29.22■■■□□ 2.27
SPI1-201ENST00000227163 KDRP35968 1356 aa29.22■■■□□ 2.27
SPI1-201ENST00000227163 ERVV-2B6SEH9 535 aa29.21■■■□□ 2.27
SPI1-201ENST00000227163 YBX3P16989 372 aaKnown RBP eCLIP29.21■■■□□ 2.272e-8■□□□□ 8.6
SPI1-201ENST00000227163 ZNF831Q5JPB2 1677 aa29.2■■■□□ 2.26
SPI1-201ENST00000227163 KDM6AO15550 1401 aaPredicted RBP29.2■■■□□ 2.26
SPI1-201ENST00000227163 C1orf141Q5JVX7 400 aa29.19■■■□□ 2.26
SPI1-201ENST00000227163 SMIM5Q71RC9 77 aa29.18■■■□□ 2.26
SPI1-201ENST00000227163 AEBP1Q8IUX7 1158 aa29.18■■■□□ 2.26
SPI1-201ENST00000227163 CABP4P57796 275 aa29.16■■■□□ 2.26
SPI1-201ENST00000227163 RBM42Q9BTD8 480 aaKnown RBP29.16■■■□□ 2.26
SPI1-201ENST00000227163 COL5A3P25940 1745 aaPredicted RBP29.16■■■□□ 2.26
SPI1-201ENST00000227163 SULT6B1Q6IMI4 303 aa29.14■■■□□ 2.26
SPI1-201ENST00000227163 RTCBQ9Y3I0 505 aaKnown RBP29.14■■■□□ 2.26
SPI1-201ENST00000227163 KIF7Q2M1P5 1343 aa29.14■■■□□ 2.25
SPI1-201ENST00000227163 GIGYF1O75420 1035 aaPredicted RBP29.13■■■□□ 2.25
SPI1-201ENST00000227163 MTHFSP49914 203 aa29.13■■■□□ 2.25
SPI1-201ENST00000227163 AMER1Q5JTC6 1135 aaPredicted RBP29.1■■■□□ 2.25
SPI1-201ENST00000227163 CNTNAP4Q9C0A0 1308 aa29.1■■■□□ 2.25
SPI1-201ENST00000227163 MMP10P09238 476 aa29.09■■■□□ 2.25
SPI1-201ENST00000227163 C1QTNF8P60827 252 aa29.09■■■□□ 2.25
SPI1-201ENST00000227163 TRAPPC3LQ5T215 181 aa29.09■■■□□ 2.25
SPI1-201ENST00000227163 CICQ96RK0 1608 aaPredicted RBP29.09■■■□□ 2.25
SPI1-201ENST00000227163 ADRA2BP18089 450 aa29.08■■■□□ 2.25
SPI1-201ENST00000227163 IL13P35225 146 aa29.08■■■□□ 2.25
SPI1-201ENST00000227163 SLC4A9Q96Q91 983 aa29.07■■■□□ 2.24
SPI1-201ENST00000227163 SCN11AQ9UI33 1791 aa29.07■■■□□ 2.24
SPI1-201ENST00000227163 WWC3Q9ULE0 1092 aa29.07■■■□□ 2.24
SPI1-201ENST00000227163 SENP3-EIF4A1A0A087X0R7 540 aa29.06■■■□□ 2.24
SPI1-201ENST00000227163 RC3H1Q5TC82 1133 aaKnown RBP29.06■■■□□ 2.24
SPI1-201ENST00000227163 C4AP0C0L4 1744 aa29.06■■■□□ 2.24
SPI1-201ENST00000227163 ATP10DQ9P241 1426 aa29.05■■■□□ 2.24
SPI1-201ENST00000227163 PTCD1O75127 700 aaKnown RBP29.04■■■□□ 2.24
SPI1-201ENST00000227163 RFC4P35249 363 aa29.03■■■□□ 2.24
SPI1-201ENST00000227163 NLGN1Q8N2Q7 840 aa29.03■■■□□ 2.24
SPI1-201ENST00000227163 NFATC2IPQ8NCF5 419 aa29.02■■■□□ 2.24
SPI1-201ENST00000227163 TJP1Q07157 1748 aa29.02■■■□□ 2.24
SPI1-201ENST00000227163 KIF13BQ9NQT8 1826 aa29.01■■■□□ 2.24
SPI1-201ENST00000227163 C10orf71Q711Q0 1435 aa29.01■■■□□ 2.23
SPI1-201ENST00000227163 PXDNLA1KZ92 1463 aa29■■■□□ 2.23
SPI1-201ENST00000227163 RPS6KA4O75676 772 aa29■■■□□ 2.23
SPI1-201ENST00000227163 AKAP4Q5JQC9 854 aa29■■■□□ 2.23
SPI1-201ENST00000227163 ARHGEF1Q92888 912 aaKnown RBP29■■■□□ 2.23
SPI1-201ENST00000227163 MYH14Q7Z406 1995 aaKnown RBP29■■■□□ 2.23
SPI1-201ENST00000227163 MRC1P22897 1456 aa28.99■■■□□ 2.23
SPI1-201ENST00000227163 CC2D1BQ5T0F9 858 aaKnown RBP28.99■■■□□ 2.23
SPI1-201ENST00000227163 HMOX1P09601 288 aa28.98■■■□□ 2.23
SPI1-201ENST00000227163 ADCY9O60503 1353 aa28.98■■■□□ 2.23
SPI1-201ENST00000227163 CRKLP46109 303 aaKnown RBP28.97■■■□□ 2.23
SPI1-201ENST00000227163 CCDC87Q9NVE4 849 aa28.97■■■□□ 2.23
SPI1-201ENST00000227163 GYS1P13807 737 aa28.96■■■□□ 2.23
SPI1-201ENST00000227163 PARP3Q9Y6F1 533 aa28.96■■■□□ 2.23
SPI1-201ENST00000227163 KIAA1551Q9HCM1 1747 aa28.96■■■□□ 2.23
SPI1-201ENST00000227163 VIRMAQ69YN4 1812 aaKnown RBP28.95■■■□□ 2.23
SPI1-201ENST00000227163 DIAPH1O60610 1272 aaKnown RBP28.95■■■□□ 2.22
SPI1-201ENST00000227163 SLC52A2Q9HAB3 445 aa28.95■■■□□ 2.22
SPI1-201ENST00000227163 GPBP1L1Q9HC44 474 aaPredicted RBP28.95■■■□□ 2.22
SPI1-201ENST00000227163 N4BP2Q86UW6 1770 aaPredicted RBP28.95■■■□□ 2.22
SPI1-201ENST00000227163 TGFB2P61812 414 aa28.93■■■□□ 2.22
SPI1-201ENST00000227163 ZNF526Q8TF50 670 aaPredicted RBP28.91■■■□□ 2.22
SPI1-201ENST00000227163 USP42Q9H9J4 1324 aaKnown RBP28.91■■■□□ 2.22
SPI1-201ENST00000227163 NPC1L1Q9UHC9 1359 aa28.9■■■□□ 2.22
SPI1-201ENST00000227163 PER1O15534 1290 aaPredicted RBP28.9■■■□□ 2.22
SPI1-201ENST00000227163 ADAMTS7Q9UKP4 1686 aa28.89■■■□□ 2.22
SPI1-201ENST00000227163 RNMTO43148 476 aaKnown RBP28.89■■■□□ 2.22
SPI1-201ENST00000227163 CNGB1Q14028 1251 aaPredicted RBP28.89■■■□□ 2.22
SPI1-201ENST00000227163 BCS1LQ9Y276 419 aa28.89■■■□□ 2.22
SPI1-201ENST00000227163 COL3A1P02461 1466 aaPredicted RBP28.89■■■□□ 2.22
SPI1-201ENST00000227163 SRP68Q9UHB9 627 aaKnown RBP28.88■■■□□ 2.21
SPI1-201ENST00000227163 KCPQ6ZWJ8 1503 aa28.88■■■□□ 2.21
SPI1-201ENST00000227163 A0A0G2JLW4 131 aa28.87■■■□□ 2.21
SPI1-201ENST00000227163 DNAJC10Q8IXB1 793 aa28.87■■■□□ 2.21
SPI1-201ENST00000227163 LGR6Q9HBX8 967 aa28.87■■■□□ 2.21
SPI1-201ENST00000227163 MTHFSDQ2M296 383 aaKnown RBP28.86■■■□□ 2.21
SPI1-201ENST00000227163 BRCA1P38398 1863 aaKnown RBP28.85■■■□□ 2.21
SPI1-201ENST00000227163 U2SURPO15042 1029 aaKnown RBP28.85■■■□□ 2.21
SPI1-201ENST00000227163 ZPR1O75312 459 aa28.84■■■□□ 2.21
SPI1-201ENST00000227163 DPEP1P16444 411 aa28.84■■■□□ 2.21
SPI1-201ENST00000227163 SLC39A6Q13433 755 aa28.84■■■□□ 2.21
SPI1-201ENST00000227163 FKBP8Q14318 412 aa28.84■■■□□ 2.21
SPI1-201ENST00000227163 INTS5Q6P9B9 1019 aaKnown RBP28.84■■■□□ 2.21
SPI1-201ENST00000227163 UBR2Q8IWV8 1755 aa28.83■■■□□ 2.21
SPI1-201ENST00000227163 SOS1Q07889 1333 aaPredicted RBP28.83■■■□□ 2.21
SPI1-201ENST00000227163 FCHSD2O94868 740 aa28.82■■■□□ 2.2
SPI1-201ENST00000227163 COL15A1P39059 1388 aa28.81■■■□□ 2.2
SPI1-201ENST00000227163 DDR1Q08345 913 aa28.81■■■□□ 2.2
SPI1-201ENST00000227163 TTC5Q8N0Z6 440 aa28.81■■■□□ 2.2
SPI1-201ENST00000227163 ARFGEF1Q9Y6D6 1849 aa28.79■■■□□ 2.2
SPI1-201ENST00000227163 GAS2L2Q8NHY3 880 aa28.79■■■□□ 2.2
SPI1-201ENST00000227163 CYP19A1P11511 503 aaPredicted RBP28.78■■■□□ 2.2
SPI1-201ENST00000227163 ARHGAP27Q6ZUM4 889 aa28.78■■■□□ 2.2
SPI1-201ENST00000227163 TEFQ10587 303 aa28.77■■■□□ 2.2
SPI1-201ENST00000227163 USPL1Q5W0Q7 1092 aa28.77■■■□□ 2.2
SPI1-201ENST00000227163 VSIG10Q8N0Z9 540 aa28.77■■■□□ 2.2
SPI1-201ENST00000227163 CFAP53Q96M91 514 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms