RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CHD4Q14839 1912 aa24.39■■□□□ 1.5
PFN1-201ENST00000225655 MSL1Q68DK7 614 aa24.39■■□□□ 1.49
PFN1-201ENST00000225655 ATP6V1AP38606 617 aa24.38■■□□□ 1.49
PFN1-201ENST00000225655 ITPK1Q13572 414 aa24.38■■□□□ 1.49
PFN1-201ENST00000225655 AMIGO3Q86WK7 504 aa24.38■■□□□ 1.49
PFN1-201ENST00000225655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.37■■□□□ 1.49
PFN1-201ENST00000225655 SSFA2P28290 1259 aa24.37■■□□□ 1.49
PFN1-201ENST00000225655 MTHFSP49914 203 aa24.37■■□□□ 1.49
PFN1-201ENST00000225655 C1orf141Q5JVX7 400 aa24.37■■□□□ 1.49
PFN1-201ENST00000225655 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
PFN1-201ENST00000225655 NPC1L1Q9UHC9 1359 aa24.35■■□□□ 1.49
PFN1-201ENST00000225655 PHF14O94880 888 aa24.35■■□□□ 1.49
PFN1-201ENST00000225655 GPR162Q16538 588 aa24.35■■□□□ 1.49
PFN1-201ENST00000225655 NLGN2Q8NFZ4 835 aa24.35■■□□□ 1.49
PFN1-201ENST00000225655 CABP4P57796 275 aa24.34■■□□□ 1.49
PFN1-201ENST00000225655 CC2D1BQ5T0F9 858 aaKnown RBP24.34■■□□□ 1.49
PFN1-201ENST00000225655 GNPATO15228 680 aa24.33■■□□□ 1.49
PFN1-201ENST00000225655 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
PFN1-201ENST00000225655 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
PFN1-201ENST00000225655 SCN11AQ9UI33 1791 aa24.32■■□□□ 1.48
PFN1-201ENST00000225655 SLC4A9Q96Q91 983 aa24.31■■□□□ 1.48
PFN1-201ENST00000225655 RBM42Q9BTD8 480 aaKnown RBP24.31■■□□□ 1.48
PFN1-201ENST00000225655 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
PFN1-201ENST00000225655 UTRNP46939 3433 aa24.31■■□□□ 1.48
PFN1-201ENST00000225655 AKAP4Q5JQC9 854 aa24.29■■□□□ 1.48
PFN1-201ENST00000225655 DIAPH1O60610 1272 aaKnown RBP24.28■■□□□ 1.48
PFN1-201ENST00000225655 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
PFN1-201ENST00000225655 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
PFN1-201ENST00000225655 RC3H1Q5TC82 1133 aaKnown RBP24.27■■□□□ 1.48
PFN1-201ENST00000225655 CNTNAP4Q9C0A0 1308 aa24.27■■□□□ 1.48
PFN1-201ENST00000225655 HMOX1P09601 288 aa24.26■■□□□ 1.47
PFN1-201ENST00000225655 ZNF784Q8NCA9 323 aaPredicted RBP24.26■■□□□ 1.47
PFN1-201ENST00000225655 RTCBQ9Y3I0 505 aaKnown RBP24.26■■□□□ 1.47
PFN1-201ENST00000225655 CICQ96RK0 1608 aaPredicted RBP24.25■■□□□ 1.47
PFN1-201ENST00000225655 COL3A1P02461 1466 aaPredicted RBP24.25■■□□□ 1.47
PFN1-201ENST00000225655 VIRMAQ69YN4 1812 aaKnown RBP24.24■■□□□ 1.47
PFN1-201ENST00000225655 ADRA2BP18089 450 aa24.24■■□□□ 1.47
PFN1-201ENST00000225655 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
PFN1-201ENST00000225655 MRC1P22897 1456 aa24.24■■□□□ 1.47
PFN1-201ENST00000225655 MYH14Q7Z406 1995 aaKnown RBP24.23■■□□□ 1.47
PFN1-201ENST00000225655 GRIN3BO60391 1043 aa24.23■■□□□ 1.47
PFN1-201ENST00000225655 PTCD1O75127 700 aaKnown RBP24.23■■□□□ 1.47
PFN1-201ENST00000225655 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.473e-14■■□□□ 14.4
PFN1-201ENST00000225655 TJP1Q07157 1748 aa24.22■■□□□ 1.47
PFN1-201ENST00000225655 ADAMTS7Q9UKP4 1686 aa24.22■■□□□ 1.47
PFN1-201ENST00000225655 RPS6KA4O75676 772 aa24.21■■□□□ 1.47
PFN1-201ENST00000225655 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
PFN1-201ENST00000225655 SLC52A2Q9HAB3 445 aa24.21■■□□□ 1.47
PFN1-201ENST00000225655 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
PFN1-201ENST00000225655 MTHFSDQ2M296 383 aaKnown RBP24.2■■□□□ 1.46
PFN1-201ENST00000225655 LGR6Q9HBX8 967 aa24.2■■□□□ 1.46
PFN1-201ENST00000225655 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
PFN1-201ENST00000225655 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
PFN1-201ENST00000225655 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
PFN1-201ENST00000225655 MMP10P09238 476 aa24.18■■□□□ 1.46
PFN1-201ENST00000225655 NLGN1Q8N2Q7 840 aa24.18■■□□□ 1.46
PFN1-201ENST00000225655 GOLGB1Q14789 3259 aaKnown RBP24.17■■□□□ 1.46
PFN1-201ENST00000225655 CRKLP46109 303 aaKnown RBP24.17■■□□□ 1.46
PFN1-201ENST00000225655 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
PFN1-201ENST00000225655 RFC4P35249 363 aa24.16■■□□□ 1.46
PFN1-201ENST00000225655 U2SURPO15042 1029 aaKnown RBP24.15■■□□□ 1.46
PFN1-201ENST00000225655 GYS1P13807 737 aa24.15■■□□□ 1.46
PFN1-201ENST00000225655 KCPQ6ZWJ8 1503 aa24.13■■□□□ 1.45
PFN1-201ENST00000225655 INTS5Q6P9B9 1019 aaKnown RBP24.12■■□□□ 1.45
PFN1-201ENST00000225655 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
PFN1-201ENST00000225655 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
PFN1-201ENST00000225655 SLC39A6Q13433 755 aa24.11■■□□□ 1.45
PFN1-201ENST00000225655 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
PFN1-201ENST00000225655 GAS2L2Q8NHY3 880 aa24.1■■□□□ 1.45
PFN1-201ENST00000225655 KIAA1551Q9HCM1 1747 aa24.1■■□□□ 1.45
PFN1-201ENST00000225655 C10orf71Q711Q0 1435 aa24.1■■□□□ 1.45
PFN1-201ENST00000225655 CCDC87Q9NVE4 849 aa24.09■■□□□ 1.45
PFN1-201ENST00000225655 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
PFN1-201ENST00000225655 PXDNLA1KZ92 1463 aa24.08■■□□□ 1.45
PFN1-201ENST00000225655 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
PFN1-201ENST00000225655 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.45
PFN1-201ENST00000225655 SIPA1L3O60292 1781 aaPredicted RBP24.07■■□□□ 1.44
PFN1-201ENST00000225655 PPP2R1AP30153 589 aa24.07■■□□□ 1.44
PFN1-201ENST00000225655 TGFB2P61812 414 aa24.07■■□□□ 1.44
PFN1-201ENST00000225655 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
PFN1-201ENST00000225655 PARP3Q9Y6F1 533 aa24.07■■□□□ 1.44
PFN1-201ENST00000225655 N4BP2Q86UW6 1770 aaPredicted RBP24.06■■□□□ 1.44
PFN1-201ENST00000225655 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
PFN1-201ENST00000225655 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
PFN1-201ENST00000225655 SOS1Q07889 1333 aaPredicted RBP24.06■■□□□ 1.44
PFN1-201ENST00000225655 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
PFN1-201ENST00000225655 WWC3Q9ULE0 1092 aa24.05■■□□□ 1.44
PFN1-201ENST00000225655 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
PFN1-201ENST00000225655 FKBP8Q14318 412 aa24.04■■□□□ 1.44
PFN1-201ENST00000225655 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
PFN1-201ENST00000225655 TEFQ10587 303 aa24.03■■□□□ 1.44
PFN1-201ENST00000225655 TTC5Q8N0Z6 440 aa24.03■■□□□ 1.44
PFN1-201ENST00000225655 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
PFN1-201ENST00000225655 CEMIPQ8WUJ3 1361 aa24.02■■□□□ 1.44
PFN1-201ENST00000225655 BRCA1P38398 1863 aaKnown RBP24.01■■□□□ 1.43
PFN1-201ENST00000225655 ZPR1O75312 459 aa24.01■■□□□ 1.43
PFN1-201ENST00000225655 A0A0G2JLW4 131 aa24■■□□□ 1.43
PFN1-201ENST00000225655 U2AF1L5P0DN76 240 aaPredicted RBP24■■□□□ 1.43
PFN1-201ENST00000225655 U2AF1Q01081 240 aaKnown RBP eCLIP24■■□□□ 1.43
PFN1-201ENST00000225655 DDR1Q08345 913 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms