RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 CYP27B1O15528 508 aa21.39■■□□□ 1.02
TVP23C-201ENST00000225576 IL2RBP14784 551 aa21.39■■□□□ 1.02
TVP23C-201ENST00000225576 EIF4A1P60842 406 aaKnown RBP21.39■■□□□ 1.02
TVP23C-201ENST00000225576 DCAF5Q96JK2 942 aa21.39■■□□□ 1.02
TVP23C-201ENST00000225576 HOXB7P09629 217 aa21.39■■□□□ 1.01
TVP23C-201ENST00000225576 CENPQQ7L2Z9 268 aaPredicted RBP21.39■■□□□ 1.01
TVP23C-201ENST00000225576 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
TVP23C-201ENST00000225576 KDM2BQ8NHM5 1336 aa21.38■■□□□ 1.01
TVP23C-201ENST00000225576 KDM6AO15550 1401 aaPredicted RBP21.38■■□□□ 1.01
TVP23C-201ENST00000225576 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
TVP23C-201ENST00000225576 ZCRB1Q8TBF4 217 aaKnown RBP21.38■■□□□ 1.01
TVP23C-201ENST00000225576 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
TVP23C-201ENST00000225576 PTPRCP08575 1304 aa21.38■■□□□ 1.01
TVP23C-201ENST00000225576 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
TVP23C-201ENST00000225576 ABCC4O15439 1325 aa21.37■■□□□ 1.01
TVP23C-201ENST00000225576 PARP4Q9UKK3 1724 aaKnown RBP21.36■■□□□ 1.01
TVP23C-201ENST00000225576 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
TVP23C-201ENST00000225576 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
TVP23C-201ENST00000225576 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
TVP23C-201ENST00000225576 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
TVP23C-201ENST00000225576 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
TVP23C-201ENST00000225576 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
TVP23C-201ENST00000225576 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
TVP23C-201ENST00000225576 KCNQ3O43525 872 aa21.34■■□□□ 1.01
TVP23C-201ENST00000225576 NKX1-1Q15270 411 aaPredicted RBP21.33■■□□□ 1
TVP23C-201ENST00000225576 HEG1Q9ULI3 1381 aa21.33■■□□□ 1
TVP23C-201ENST00000225576 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
TVP23C-201ENST00000225576 MRC1P22897 1456 aa21.32■■□□□ 1
TVP23C-201ENST00000225576 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
TVP23C-201ENST00000225576 SCN11AQ9UI33 1791 aa21.32■■□□□ 1
TVP23C-201ENST00000225576 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
TVP23C-201ENST00000225576 RGS12O14924 1447 aa21.3■■□□□ 1
TVP23C-201ENST00000225576 HDGFL1Q5TGJ6 251 aa21.3■■□□□ 1
TVP23C-201ENST00000225576 INTS3Q68E01 1043 aaKnown RBP21.3■■□□□ 1
TVP23C-201ENST00000225576 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
TVP23C-201ENST00000225576 VIRMAQ69YN4 1812 aaKnown RBP21.3■■□□□ 1
TVP23C-201ENST00000225576 ZBTB7BO15156 539 aaPredicted RBP21.29■■□□□ 1
TVP23C-201ENST00000225576 ADAMTS2O95450 1211 aa21.29■■□□□ 1
TVP23C-201ENST00000225576 ZNF790Q6PG37 636 aa21.29■■□□□ 1
TVP23C-201ENST00000225576 GIGYF1O75420 1035 aaPredicted RBP21.29■■□□□ 1
TVP23C-201ENST00000225576 IGHDP01880 384 aa21.29■■□□□ 1
TVP23C-201ENST00000225576 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
TVP23C-201ENST00000225576 CABP4P57796 275 aa21.28■■□□□ 1
TVP23C-201ENST00000225576 G2E3Q7L622 706 aa21.28■■□□□ 1
TVP23C-201ENST00000225576 USP35Q9P2H5 1018 aa21.28■■□□□ 1
TVP23C-201ENST00000225576 DISP2A7MBM2 1401 aa21.27■■□□□ 1
TVP23C-201ENST00000225576 JCADQ9P266 1359 aa21.27■■□□□ 1
TVP23C-201ENST00000225576 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
TVP23C-201ENST00000225576 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
TVP23C-201ENST00000225576 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
TVP23C-201ENST00000225576 RWDD1Q9H446 243 aaPredicted RBP21.27■■□□□ 1
TVP23C-201ENST00000225576 FLIIQ13045 1269 aa21.26■□□□□ 0.99
TVP23C-201ENST00000225576 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
TVP23C-201ENST00000225576 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
TVP23C-201ENST00000225576 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
TVP23C-201ENST00000225576 TSHZ2Q9NRE2 1034 aa21.24■□□□□ 0.99
TVP23C-201ENST00000225576 THRAP3Q9Y2W1 955 aaKnown RBP21.24■□□□□ 0.99
TVP23C-201ENST00000225576 SLC39A6Q13433 755 aa21.24■□□□□ 0.99
TVP23C-201ENST00000225576 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
TVP23C-201ENST00000225576 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
TVP23C-201ENST00000225576 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
TVP23C-201ENST00000225576 SLIT2O94813 1529 aa21.23■□□□□ 0.99
TVP23C-201ENST00000225576 CCT4P50991 539 aaKnown RBP21.22■□□□□ 0.99
TVP23C-201ENST00000225576 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
TVP23C-201ENST00000225576 DBF4Q9UBU7 674 aaPredicted RBP21.22■□□□□ 0.99
TVP23C-201ENST00000225576 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
TVP23C-201ENST00000225576 SPATA31A1Q5TZJ5 1347 aa21.22■□□□□ 0.99
TVP23C-201ENST00000225576 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
TVP23C-201ENST00000225576 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
TVP23C-201ENST00000225576 CHPF2Q9P2E5 772 aa21.21■□□□□ 0.99
TVP23C-201ENST00000225576 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
TVP23C-201ENST00000225576 ZNF496Q96IT1 587 aaPredicted RBP21.2■□□□□ 0.98
TVP23C-201ENST00000225576 SPATA31A6Q5VVP1 1343 aa21.2■□□□□ 0.98
TVP23C-201ENST00000225576 EXOC5O00471 708 aa21.19■□□□□ 0.98
TVP23C-201ENST00000225576 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
TVP23C-201ENST00000225576 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
TVP23C-201ENST00000225576 F6X3S4 739 aa21.19■□□□□ 0.98
TVP23C-201ENST00000225576 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
TVP23C-201ENST00000225576 SPATA31A5Q5VU36 1347 aa21.18■□□□□ 0.98
TVP23C-201ENST00000225576 SPATA31A7Q8IWB4 1347 aa21.18■□□□□ 0.98
TVP23C-201ENST00000225576 PHAXQ9H814 394 aaKnown RBP21.18■□□□□ 0.98
TVP23C-201ENST00000225576 PRAMEF22A3QJZ6 481 aa21.17■□□□□ 0.98
TVP23C-201ENST00000225576 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
TVP23C-201ENST00000225576 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
TVP23C-201ENST00000225576 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
TVP23C-201ENST00000225576 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
TVP23C-201ENST00000225576 HYPKQ9NX55 129 aa21.16■□□□□ 0.98
TVP23C-201ENST00000225576 PXDNLA1KZ92 1463 aa21.16■□□□□ 0.98
TVP23C-201ENST00000225576 TNS2Q63HR2 1409 aa21.15■□□□□ 0.98
TVP23C-201ENST00000225576 PDIA6Q15084 440 aa21.14■□□□□ 0.97
TVP23C-201ENST00000225576 SMC5Q8IY18 1101 aa21.14■□□□□ 0.97
TVP23C-201ENST00000225576 FNBP4Q8N3X1 1017 aaPredicted RBP21.14■□□□□ 0.97
TVP23C-201ENST00000225576 NGLY1Q96IV0 654 aa21.14■□□□□ 0.97
TVP23C-201ENST00000225576 TMOD3Q9NYL9 352 aa21.14■□□□□ 0.97
TVP23C-201ENST00000225576 ANXA1P04083 346 aa21.12■□□□□ 0.97
TVP23C-201ENST00000225576 PROSER3Q2NL68 480 aa21.12■□□□□ 0.97
TVP23C-201ENST00000225576 C8orf37Q96NL8 207 aa21.12■□□□□ 0.97
TVP23C-201ENST00000225576 MEIS3Q99687 375 aa21.12■□□□□ 0.97
TVP23C-201ENST00000225576 C1orf115Q9H7X2 142 aa21.12■□□□□ 0.97
TVP23C-201ENST00000225576 WNK3Q9BYP7 1800 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms