RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ABCC4O15439 1325 aa16.31■□□□□ 0.2
PLOD3-201ENST00000223127 TRAK2O60296 914 aa16.31■□□□□ 0.2
PLOD3-201ENST00000223127 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
PLOD3-201ENST00000223127 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
PLOD3-201ENST00000223127 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
PLOD3-201ENST00000223127 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
PLOD3-201ENST00000223127 ERBB3P21860 1342 aa16.3■□□□□ 0.2
PLOD3-201ENST00000223127 G2E3Q7L622 706 aa16.29■□□□□ 0.2
PLOD3-201ENST00000223127 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
PLOD3-201ENST00000223127 SPATA31A3Q5VYP0 1347 aa16.29■□□□□ 0.2
PLOD3-201ENST00000223127 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
PLOD3-201ENST00000223127 MRE11P49959 708 aa16.28■□□□□ 0.2
PLOD3-201ENST00000223127 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
PLOD3-201ENST00000223127 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
PLOD3-201ENST00000223127 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
PLOD3-201ENST00000223127 SLC4A10Q6U841 1118 aa16.28■□□□□ 0.2
PLOD3-201ENST00000223127 F6X3S4 739 aa16.27■□□□□ 0.2
PLOD3-201ENST00000223127 TEFQ10587 303 aa16.27■□□□□ 0.2
PLOD3-201ENST00000223127 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
PLOD3-201ENST00000223127 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.19
PLOD3-201ENST00000223127 STK31Q9BXU1 1019 aa16.27■□□□□ 0.19
PLOD3-201ENST00000223127 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
PLOD3-201ENST00000223127 KCNQ3O43525 872 aa16.26■□□□□ 0.19
PLOD3-201ENST00000223127 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
PLOD3-201ENST00000223127 GRPEL1Q9HAV7 217 aa16.26■□□□□ 0.19
PLOD3-201ENST00000223127 XIRP1Q702N8 1843 aaKnown RBP16.25■□□□□ 0.19
PLOD3-201ENST00000223127 PHRF1Q9P1Y6 1649 aaKnown RBP16.25■□□□□ 0.19
PLOD3-201ENST00000223127 PXDNQ92626 1479 aa16.25■□□□□ 0.19
PLOD3-201ENST00000223127 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
PLOD3-201ENST00000223127 DDX11L8A8MPP1 907 aa16.25■□□□□ 0.19
PLOD3-201ENST00000223127 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
PLOD3-201ENST00000223127 CHMP4BQ9H444 224 aaKnown RBP16.24■□□□□ 0.19
PLOD3-201ENST00000223127 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 CCDC30Q5VVM6 783 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 PKNOX2Q96KN3 472 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 PTPRCP08575 1304 aa16.24■□□□□ 0.19
PLOD3-201ENST00000223127 HSP90AA1P07900 732 aaKnown RBP16.23■□□□□ 0.19
PLOD3-201ENST00000223127 DDIT3P35638 169 aa16.23■□□□□ 0.19
PLOD3-201ENST00000223127 RGS12O14924 1447 aa16.23■□□□□ 0.19
PLOD3-201ENST00000223127 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
PLOD3-201ENST00000223127 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
PLOD3-201ENST00000223127 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
PLOD3-201ENST00000223127 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
PLOD3-201ENST00000223127 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 LNPKQ9C0E8 428 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 LRRC37A3O60309 1634 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 ESPNB1AK53 854 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
PLOD3-201ENST00000223127 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
PLOD3-201ENST00000223127 FLIIQ13045 1269 aa16.21■□□□□ 0.19
PLOD3-201ENST00000223127 HSP90AA2PQ14568 343 aaPredicted RBP16.21■□□□□ 0.19
PLOD3-201ENST00000223127 MEIS3Q99687 375 aa16.21■□□□□ 0.19
PLOD3-201ENST00000223127 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.18
PLOD3-201ENST00000223127 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.18
PLOD3-201ENST00000223127 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
PLOD3-201ENST00000223127 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
PLOD3-201ENST00000223127 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
PLOD3-201ENST00000223127 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
PLOD3-201ENST00000223127 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
PLOD3-201ENST00000223127 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
PLOD3-201ENST00000223127 ANXA1P04083 346 aa16.18■□□□□ 0.18
PLOD3-201ENST00000223127 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
PLOD3-201ENST00000223127 NUCB1Q02818 461 aa16.17■□□□□ 0.18
PLOD3-201ENST00000223127 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
PLOD3-201ENST00000223127 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
PLOD3-201ENST00000223127 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
PLOD3-201ENST00000223127 CHPF2Q9P2E5 772 aa16.17■□□□□ 0.18
PLOD3-201ENST00000223127 MEGF6O75095 1541 aa16.16■□□□□ 0.18
PLOD3-201ENST00000223127 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
PLOD3-201ENST00000223127 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
PLOD3-201ENST00000223127 TOM1L2Q6ZVM7 507 aa16.16■□□□□ 0.18
PLOD3-201ENST00000223127 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
PLOD3-201ENST00000223127 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
PLOD3-201ENST00000223127 APBB1O00213 710 aa16.15■□□□□ 0.18
PLOD3-201ENST00000223127 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
PLOD3-201ENST00000223127 SNX21Q969T3 373 aa16.15■□□□□ 0.18
PLOD3-201ENST00000223127 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
PLOD3-201ENST00000223127 PHKG2P15735 406 aa16.15■□□□□ 0.18
PLOD3-201ENST00000223127 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
PLOD3-201ENST00000223127 CPDO75976 1380 aa16.14■□□□□ 0.17
PLOD3-201ENST00000223127 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
PLOD3-201ENST00000223127 CEP85Q6P2H3 762 aa16.14■□□□□ 0.17
PLOD3-201ENST00000223127 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
PLOD3-201ENST00000223127 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
PLOD3-201ENST00000223127 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
PLOD3-201ENST00000223127 COL18A1P39060 1754 aa16.13■□□□□ 0.17
PLOD3-201ENST00000223127 CYP27B1O15528 508 aa16.13■□□□□ 0.17
PLOD3-201ENST00000223127 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
PLOD3-201ENST00000223127 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
PLOD3-201ENST00000223127 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
PLOD3-201ENST00000223127 ANKRD44Q8N8A2 993 aa16.12■□□□□ 0.17
PLOD3-201ENST00000223127 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
PLOD3-201ENST00000223127 CAMTA1Q9Y6Y1 1673 aa16.12■□□□□ 0.17
PLOD3-201ENST00000223127 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
PLOD3-201ENST00000223127 GBP4Q96PP9 640 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms